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从头网络分析揭示自闭症的致病基因与共患特征的发育关联。

De novo network analysis reveals autism causal genes and developmental links to co-occurring traits.

机构信息

The Liggins Institute, The University of Auckland, Auckland, New Zealand.

School of Computer Science, University of Auckland, Auckland, New Zealand.

出版信息

Life Sci Alliance. 2023 Aug 8;6(10). doi: 10.26508/lsa.202302142. Print 2023 Oct.

Abstract

Autism is a complex neurodevelopmental condition that manifests in various ways. Autism is often accompanied by other conditions, such as attention-deficit/hyperactivity disorder and schizophrenia, which can complicate diagnosis and management. Although research has investigated the role of specific genes in autism, their relationship with co-occurring traits is not fully understood. To address this, we conducted a two-sample Mendelian randomisation analysis and identified four genes located at the 17q21.31 locus that are putatively causal for autism in fetal cortical tissue (, , , and ). was also identified as putatively causal for autism in adult cortical tissue. By integrating data from expression quantitative trait loci, genes and protein interactions, we identified that the 17q21.31 locus contributes to the intersection between autism and other neurological traits in fetal cortical tissue. We also identified a distinct cluster of co-occurring traits, including cognition and worry, linked to the genetic loci at 3p21.1. Our findings provide insights into the relationship between autism and co-occurring traits, which could be used to develop predictive models for more accurate diagnosis and better clinical management.

摘要

自闭症是一种复杂的神经发育障碍,表现形式多种多样。自闭症通常伴随着其他疾病,如注意力缺陷/多动障碍和精神分裂症,这可能使诊断和管理复杂化。虽然研究已经探讨了特定基因在自闭症中的作用,但它们与共病特征的关系尚未完全理解。为了解决这个问题,我们进行了两样本孟德尔随机化分析,确定了四个位于 17q21.31 位点的基因,这些基因在胎儿皮质组织中被认为与自闭症有关(、、、和)。还确定了在成人皮质组织中与自闭症有关的基因。通过整合表达数量性状基因座、基因和蛋白质相互作用的数据,我们发现 17q21.31 位点在胎儿皮质组织中导致自闭症与其他神经特征的交叉。我们还发现了一个与 3p21.1 上的遗传基因座相关的独特的共病特征集群,包括认知和担忧。我们的研究结果提供了自闭症与共病特征之间关系的深入了解,这可能用于开发更准确的预测模型,以进行诊断和更好的临床管理。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/57c9/10410065/8540e740ed27/LSA-2023-02142_Fig1.jpg

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