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对干旱胁迫下毛竹(Phyllostachys edulis)ALDH 基因家族的全基因组特征和基因表达分析。

Genome-wide characterization and gene expression analyses of ALDH gene family in response to drought stress in moso bamboo (Phyllostachys edulis).

机构信息

State Key Laboratory of Tree Genetics and Breeding, Chinese Academy of Forestry, Beijing, 100091, China; Key Laboratory of Tree Breeding of Zhejiang Province, Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Hangzhou, Zhejiang, 311400, China.

State Key Laboratory of Tree Genetics and Breeding, Chinese Academy of Forestry, Beijing, 100091, China; Key Laboratory of Tree Breeding of Zhejiang Province, Research Institute of Subtropical Forestry, Chinese Academy of Forestry, Hangzhou, Zhejiang, 311400, China.

出版信息

Plant Physiol Biochem. 2023 Sep;202:107954. doi: 10.1016/j.plaphy.2023.107954. Epub 2023 Aug 9.

Abstract

Aldehyde dehydrogenase (ALDH) superfamily, comprising enzymes dependent on NAD or NADP, plays an important role in controlling plant growth and development, as well as in responsing to phytohormone and environmental stress. These enzymes possess the ability to prevent toxic effects of aldehydes by converting them into their corresponding carboxylic acids. However, the potential function of ALDH genes in moso bamboo (Phyllostachys edulis) remains largely unknown. In this study, the ALDH gene superfamily in moso bamboo was analyzed through genome-wide screening, the evolutionary relationship of expansion genes was conducted. Tissue-specific expression patterns of ALDH genes were observed in 26 different tissues. Plant hormone and environmental stress responsive cis-elements were identified in the promoter of ALDH genes, which were supported by public databases data on the expression patterns under various abiotic stresses and hormone treatments. ALDH activity was increased in moso bamboo seedlings exposed to drought, compared to control condition. Furthermore, PeALDH2B2 was found to physically interact with PeGPB1 in response to drought. Overall, the study provides a comprehensive analysis of the ALDH family in moso bamboo and contributes to our understanding of the function of ALDH genes in growth, development, and adaptation to drought stresses.

摘要

醛脱氢酶(ALDH)超家族由依赖 NAD 或 NADP 的酶组成,在控制植物生长发育以及对植物激素和环境胁迫的响应中发挥着重要作用。这些酶具有将醛转化为相应羧酸的能力,从而防止醛的毒性作用。然而,ALDH 基因在毛竹(Phyllostachys edulis)中的潜在功能在很大程度上尚不清楚。本研究通过全基因组筛选分析了毛竹中的 ALDH 基因超家族,并对扩展基因的进化关系进行了分析。观察到 26 种不同组织中 ALDH 基因的组织特异性表达模式。在 ALDH 基因启动子中鉴定到植物激素和环境胁迫响应顺式元件,这些元件得到了公共数据库中各种非生物胁迫和激素处理下表达模式数据的支持。与对照条件相比,干旱胁迫下毛竹幼苗的 ALDH 活性增加。此外,发现 PeALDH2B2 可响应干旱与 PeGPB1 发生物理相互作用。总体而言,该研究全面分析了毛竹中的 ALDH 家族,并有助于我们理解 ALDH 基因在生长、发育和适应干旱胁迫方面的功能。

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