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具有系统发育基因组学重要性的十个物种菌株的基因组序列草图。

Draft genome sequences for ten strains of species that have phylogenomic importance.

作者信息

Harrison Jamie, Hussain Rana Muhammad Fraz, Greer Shannon F, Ntoukakis Vardis, Aspin Andrew, Vicente Joana G, Grant Murray, Studholme David J

机构信息

Biosciences, University of Exeter, Exeter, EX4 4QD, UK.

Gibbet Hill Campus, School of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK.

出版信息

Access Microbiol. 2023 Jul 14;5(7). doi: 10.1099/acmi.0.000532.v3. eCollection 2023.

Abstract

Here we report draft-quality genome sequences for pathotype strains of eight plant-pathogenic bacterial pathovars: pv. , pv. , pv. , pv. , pv. , pv. , pv. and pv. (= pv. ). We also sequenced the type strain of species and the unclassified strain NCPPB 1067. These data will be useful for phylogenomic and taxonomic studies, filling some important gaps in sequence coverage of phylogenetic diversity. We include representatives of previously under-sequenced pathovars and species-level clades. Furthermore, these genome sequences may be useful in elucidating the molecular basis for important phenotypes, such as biosynthesis of coronatine-related toxins and degradation of fungal toxin cercosporin.

摘要

在此,我们报告了8种植物致病细菌致病变种致病型菌株的草图质量基因组序列: pv. 、 pv. 、 pv. 、 pv. 、 pv. 、 pv. 、 pv. 和 pv. (= pv. )。我们还对 种的模式菌株和未分类的 菌株NCPPB 1067进行了测序。这些数据将有助于系统发育基因组学和分类学研究,填补 系统发育多样性序列覆盖方面的一些重要空白。我们纳入了先前测序不足的致病变种和种级分支的代表。此外,这些基因组序列可能有助于阐明重要表型的分子基础,如冠毒素相关毒素的生物合成和真菌毒素尾孢菌素的降解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8f0d/10436009/f1984bae2abb/acmi-5-532.v3-g001.jpg

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