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利用MRI特征解读机器学习决策以区分后颅窝肿瘤类型:数据告诉了我们什么?

Deciphering Machine Learning Decisions to Distinguish between Posterior Fossa Tumor Types Using MRI Features: What Do the Data Tell Us?

作者信息

Tanyel Toygar, Nadarajan Chandran, Duc Nguyen Minh, Keserci Bilgin

机构信息

Department of Computer Engineering, Yildiz Technical University, Istanbul 34349, Türkiye.

Department of Radiology, Gleneagles Hospital Kota Kinabalu, Kota Kinabalu 88100, Sabah, Malaysia.

出版信息

Cancers (Basel). 2023 Aug 8;15(16):4015. doi: 10.3390/cancers15164015.

Abstract

Machine learning (ML) models have become capable of making critical decisions on our behalf. Nevertheless, due to complexity of these models, interpreting their decisions can be challenging, and humans cannot always control them. This paper provides explanations of decisions made by ML models in diagnosing four types of posterior fossa tumors: medulloblastoma, ependymoma, pilocytic astrocytoma, and brainstem glioma. The proposed methodology involves data analysis using kernel density estimations with Gaussian distributions to examine individual MRI features, conducting an analysis on the relationships between these features, and performing a comprehensive analysis of ML model behavior. This approach offers a simple yet informative and reliable means of identifying and validating distinguishable MRI features for the diagnosis of pediatric brain tumors. By presenting a comprehensive analysis of the responses of the four pediatric tumor types to each other and to ML models in a single source, this study aims to bridge the knowledge gap in the existing literature concerning the relationship between ML and medical outcomes. The results highlight that employing a simplistic approach in the absence of very large datasets leads to significantly more pronounced and explainable outcomes, as expected. Additionally, the study also demonstrates that the pre-analysis results consistently align with the outputs of the ML models and the clinical findings reported in the existing literature.

摘要

机器学习(ML)模型已经能够代表我们做出关键决策。然而,由于这些模型的复杂性,解释它们的决策可能具有挑战性,而且人类并不总是能够控制它们。本文对ML模型在诊断四种后颅窝肿瘤(髓母细胞瘤、室管膜瘤、毛细胞型星形细胞瘤和脑干胶质瘤)时所做的决策进行了解释。所提出的方法包括使用高斯分布的核密度估计进行数据分析,以检查个体磁共振成像(MRI)特征,分析这些特征之间的关系,并对ML模型的行为进行全面分析。这种方法为识别和验证用于诊断小儿脑肿瘤的可区分MRI特征提供了一种简单但信息丰富且可靠的手段。通过在单一来源中对四种小儿肿瘤类型对彼此以及对ML模型的反应进行全面分析,本研究旨在弥合现有文献中关于ML与医疗结果之间关系的知识差距。结果表明,正如预期的那样,在没有非常大的数据集的情况下采用简单方法会导致明显更显著且可解释的结果。此外,该研究还表明,分析前的结果与ML模型的输出以及现有文献中报道的临床发现始终一致。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d9b3/10452543/d81e52ea3bd4/cancers-15-04015-g001.jpg

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