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在 和 中钙调蛋白和钙调蛋白样蛋白基因家族的全基因组特征分析及其在 扫帚病中的潜在参与的鉴定。

Genome-Wide Characterization of Calmodulin and Calmodulin-like Protein Gene Families in and Identification of Their Potential Involvement in Witches' Broom.

机构信息

College of Forestry, Henan Agricultural University, Zhengzhou 450002, China.

Institute of Paulownia, Henan Agricultural University, Zhengzhou 450002, China.

出版信息

Genes (Basel). 2023 Jul 27;14(8):1540. doi: 10.3390/genes14081540.

DOI:10.3390/genes14081540
PMID:37628592
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10454933/
Abstract

As significant Ca sensors, calmodulin (CaM) and calmodulin-like proteins (CML), have been associated with a variety of environmental conditions in plants. However, whether CaMs/CMLs are related to the stress of phytoplasma infection has not been reported in . In the current study, 5 and 58 were detected through a genome-wide investigation. The number of EF-hand motifs in all PfCaMs/CMLs varied. Bioinformatics analyses, including protein characteristics, conserved domain, gene structure, -elements, evolutionary relationship, collinearity, chromosomal location, post-translation modification site, subcellular localization and expression pattern analyses, represented the conservation and divergence of /. Furthermore, some / might be involved in plants' reaction to phytoplasma infection and exogenous calcium therapy, indicating these genes may play a role in abiotic as well as biotic stress responses. In addition, subcellular localization analysis showed that PfCML10 was located in the cell membrane and nucleus. In summary, these findings establish a stronger platform for their subsequent functional investigation in trees and further characterize their roles in Paulownia witches' broom (PaWB) occurrence.

摘要

作为重要的钙传感器,钙调蛋白(CaM)和钙调蛋白样蛋白(CML)与植物的各种环境条件有关。然而,在 中,CaMs/CMLs 是否与植原体感染的胁迫有关尚未报道。在本研究中,通过全基因组调查检测到 5 个 PfCaMs 和 58 个 CML。所有 PfCaMs/CMLs 中的 EF 手模体的数量不同。生物信息学分析,包括蛋白质特征、保守结构域、基因结构、调控元件、进化关系、共线性、染色体定位、翻译后修饰位点、亚细胞定位和表达模式分析,代表了 的保守性和分化性。此外,一些 可能参与植物对植原体感染和外源钙治疗的反应,表明这些基因可能在非生物和生物胁迫反应中发挥作用。此外,亚细胞定位分析表明 PfCML10 位于细胞膜和细胞核中。总之,这些发现为它们在杨树中的后续功能研究建立了一个更强的平台,并进一步表征了它们在泡桐丛枝病(PaWB)发生中的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8aa/10454933/ddbb3166d923/genes-14-01540-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8aa/10454933/63d9e3090b80/genes-14-01540-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8aa/10454933/f2f01d7e2290/genes-14-01540-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8aa/10454933/18eb1dab71ae/genes-14-01540-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8aa/10454933/a4da3caa752e/genes-14-01540-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8aa/10454933/b3f548e6fd39/genes-14-01540-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8aa/10454933/ddbb3166d923/genes-14-01540-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8aa/10454933/63d9e3090b80/genes-14-01540-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8aa/10454933/f2f01d7e2290/genes-14-01540-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8aa/10454933/18eb1dab71ae/genes-14-01540-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8aa/10454933/a4da3caa752e/genes-14-01540-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8aa/10454933/b3f548e6fd39/genes-14-01540-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8aa/10454933/ddbb3166d923/genes-14-01540-g008.jpg

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