Han Nan, Liu Zhaoqi
Chinese Academy of Sciences Key Laboratory of Genomic and Precision Medicine, Beijing Institute of Genomics, Chinese Academy of Sciences and China National Center for Bioinformation, Beijing, China.
University of Chinese Academy of Sciences, Beijing, China.
Front Cell Dev Biol. 2023 Aug 10;11:1232146. doi: 10.3389/fcell.2023.1232146. eCollection 2023.
Tumor immunotherapy has made great progress in cancer treatment but still faces several challenges, such as a limited number of targetable antigens and varying responses among patients. Alternative splicing (AS) is an essential process for the maturation of nearly all mammalian mRNAs. Recent studies show that AS contributes to expanding cancer-specific antigens and modulating immunogenicity, making it a promising solution to the above challenges. The organoid technology preserves the individual immune microenvironment and reduces the time/economic costs of the experiment model, facilitating the development of splicing-based immunotherapy. Here, we summarize three critical roles of AS in immunotherapy: resources for generating neoantigens, targets for immune-therapeutic modulation, and biomarkers to guide immunotherapy options. Subsequently, we highlight the benefits of adopting organoids to develop AS-based immunotherapies. Finally, we discuss the current challenges in studying AS-based immunotherapy in terms of existing bioinformatics algorithms and biological technologies.
肿瘤免疫疗法在癌症治疗方面取得了巨大进展,但仍面临一些挑战,例如可靶向抗原数量有限以及患者之间反应各异。可变剪接(AS)是几乎所有哺乳动物mRNA成熟的关键过程。最近的研究表明,可变剪接有助于扩展癌症特异性抗原并调节免疫原性,使其成为应对上述挑战的一个有前景的解决方案。类器官技术保留了个体免疫微环境,降低了实验模型的时间/经济成本,促进了基于剪接的免疫疗法的发展。在此,我们总结了可变剪接在免疫疗法中的三个关键作用:产生新抗原的资源、免疫治疗调节的靶点以及指导免疫治疗选择的生物标志物。随后,我们强调采用类器官来开发基于可变剪接的免疫疗法的益处。最后,我们从现有的生物信息学算法和生物技术方面讨论了研究基于可变剪接的免疫疗法目前面临的挑战。