• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

使用数据非依赖采集方法评估 Astral 质量分析仪在定量蛋白质组学中的性能。

Evaluating the Performance of the Astral Mass Analyzer for Quantitative Proteomics Using Data-Independent Acquisition.

机构信息

Department of Genome Sciences, University of Washington, 3720 15th Street NE, Seattle, Washington 98195, United States.

Thermo Fisher Scientific, Hanna-Kunath Ste. 11, 28199 Bremen, Germany.

出版信息

J Proteome Res. 2023 Oct 6;22(10):3290-3300. doi: 10.1021/acs.jproteome.3c00357. Epub 2023 Sep 8.

DOI:10.1021/acs.jproteome.3c00357
PMID:37683181
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10563156/
Abstract

We evaluate the quantitative performance of the newly released Asymmetric Track Lossless (Astral) analyzer. Using data-independent acquisition, the Thermo Scientific Orbitrap Astral mass spectrometer quantifies 5 times more peptides per unit time than state-of-the-art Thermo Scientific Orbitrap mass spectrometers, which have long been the gold standard for high-resolution quantitative proteomics. Our results demonstrate that the Orbitrap Astral mass spectrometer can produce high-quality quantitative measurements across a wide dynamic range. We also use a newly developed extracellular vesicle enrichment protocol to reach new depths of coverage in the plasma proteome, quantifying over 5000 plasma proteins in a 60 min gradient with the Orbitrap Astral mass spectrometer.

摘要

我们评估了新发布的不对称轨道无损耗(Astral)分析器的定量性能。使用数据独立采集,赛默飞世尔科技的 Orbitrap Astral 质谱仪在单位时间内定量的肽数量比长期以来一直是高分辨率定量蛋白质组学黄金标准的最先进的赛默飞世尔科技 Orbitrap 质谱仪多 5 倍。我们的结果表明,Orbitrap Astral 质谱仪可以在很宽的动态范围内产生高质量的定量测量结果。我们还使用新开发的细胞外囊泡富集方案,在血浆蛋白质组中达到新的覆盖深度,使用 Orbitrap Astral 质谱仪在 60 分钟梯度中定量超过 5000 种血浆蛋白。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0ee8/10563156/6ba4f6af6950/pr3c00357_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0ee8/10563156/986d1b211a39/pr3c00357_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0ee8/10563156/1b313645740c/pr3c00357_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0ee8/10563156/d6928bacc29f/pr3c00357_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0ee8/10563156/6ba4f6af6950/pr3c00357_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0ee8/10563156/986d1b211a39/pr3c00357_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0ee8/10563156/1b313645740c/pr3c00357_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0ee8/10563156/d6928bacc29f/pr3c00357_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0ee8/10563156/6ba4f6af6950/pr3c00357_0005.jpg

相似文献

1
Evaluating the Performance of the Astral Mass Analyzer for Quantitative Proteomics Using Data-Independent Acquisition.使用数据非依赖采集方法评估 Astral 质量分析仪在定量蛋白质组学中的性能。
J Proteome Res. 2023 Oct 6;22(10):3290-3300. doi: 10.1021/acs.jproteome.3c00357. Epub 2023 Sep 8.
2
Evaluating the Performance of the Astral Mass Analyzer for Quantitative Proteomics Using Data Independent Acquisition.使用数据非依赖采集评估星质谱分析仪在定量蛋白质组学中的性能
bioRxiv. 2023 Aug 7:2023.06.03.543570. doi: 10.1101/2023.06.03.543570.
3
Parallelized Acquisition of Orbitrap and Astral Analyzers Enables High-Throughput Quantitative Analysis.轨道阱和星状分析仪的并行采集实现高通量定量分析。
Anal Chem. 2023 Oct 24;95(42):15656-15664. doi: 10.1021/acs.analchem.3c02856. Epub 2023 Oct 10.
4
The One Hour Human Proteome.人类蛋白质组一小时绘制完成
Mol Cell Proteomics. 2024 May;23(5):100760. doi: 10.1016/j.mcpro.2024.100760. Epub 2024 Apr 3.
5
Rapid and deep proteomes by faster sequencing on a benchtop quadrupole ultra-high-field Orbitrap mass spectrometer.通过在台式四极杆超高场轨道阱质谱仪上更快地测序实现快速且深入的蛋白质组分析。
J Proteome Res. 2014 Dec 5;13(12):6187-95. doi: 10.1021/pr500985w. Epub 2014 Nov 10.
6
A Compact Quadrupole-Orbitrap Mass Spectrometer with FAIMS Interface Improves Proteome Coverage in Short LC Gradients.紧凑型四极杆轨道阱质谱仪与 FAIMS 接口联用,在短 LC 梯度下提高蛋白质组覆盖度。
Mol Cell Proteomics. 2020 Apr;19(4):716-729. doi: 10.1074/mcp.TIR119.001906. Epub 2020 Feb 12.
7
Ultra-fast label-free quantification and comprehensive proteome coverage with narrow-window data-independent acquisition.通过窄窗口数据非依赖采集实现超快速无标记定量和全面蛋白质组覆盖
Nat Biotechnol. 2024 Dec;42(12):1855-1866. doi: 10.1038/s41587-023-02099-7. Epub 2024 Feb 1.
8
The astounding exhaustiveness and speed of the Astral mass analyzer for highly complex samples is a quantum leap in the functional analysis of microbiomes.Astral 质构仪对高度复杂样本的分析具有令人惊叹的全面性和速度,是微生物组功能分析领域的重大突破。
Microbiome. 2024 Mar 7;12(1):46. doi: 10.1186/s40168-024-01766-4.
9
Evaluating the Characteristics of Reporter Ion Signal Acquired in the Orbitrap Analyzer for Isobaric Mass Tag Proteome Quantification Experiments.评估在轨道阱质谱仪中获取的用于等压质量标签蛋白质组定量实验的报告离子信号的特征。
J Proteome Res. 2017 May 5;16(5):1831-1838. doi: 10.1021/acs.jproteome.7b00092. Epub 2017 Apr 20.
10
Synergistic optimization of Liquid Chromatography and Mass Spectrometry parameters on Orbitrap Tribrid mass spectrometer for high efficient data-dependent proteomics.在轨道阱三重四极杆质谱仪上对液相色谱和质谱参数进行协同优化,以实现高效的数据依赖蛋白质组学。
J Mass Spectrom. 2021 Apr;56(4):e4653. doi: 10.1002/jms.4653. Epub 2020 Sep 13.

引用本文的文献

1
A Comprehensive Mass Spectrometry-Based Proteomic Dataset of Human Spermatozoa.基于质谱分析的人类精子蛋白质组综合数据集。
Sci Data. 2025 Aug 28;12(1):1509. doi: 10.1038/s41597-025-05824-w.
2
Single-cell multi-omics in cancer immunotherapy: from tumor heterogeneity to personalized precision treatment.癌症免疫治疗中的单细胞多组学:从肿瘤异质性到个性化精准治疗
Mol Cancer. 2025 Aug 25;24(1):221. doi: 10.1186/s12943-025-02426-3.
3
Are Solid Particles Ready for Prime-Time Proteomics?固体颗粒准备好迎接蛋白质组学的黄金时代了吗?

本文引用的文献

1
Parallelized Acquisition of Orbitrap and Astral Analyzers Enables High-Throughput Quantitative Analysis.轨道阱和星状分析仪的并行采集实现高通量定量分析。
Anal Chem. 2023 Oct 24;95(42):15656-15664. doi: 10.1021/acs.analchem.3c02856. Epub 2023 Oct 10.
2
Dynamic Data-Independent Acquisition Mass Spectrometry with Real-Time Retrospective Alignment.动态数据非依赖采集质谱联用技术与实时回溯对齐。
Anal Chem. 2023 Aug 15;95(32):11854-11858. doi: 10.1021/acs.analchem.3c00903. Epub 2023 Aug 1.
3
Functionally distinct BMP1 isoforms show an opposite pattern of abundance in plasma from non-small cell lung cancer subjects and controls.
Anal Chem. 2025 Sep 2;97(34):18681-18688. doi: 10.1021/acs.analchem.5c03073. Epub 2025 Aug 20.
4
SynchroSep-MS: Parallel LC Separations for Multiplexed Proteomics.同步分离质谱法:用于多重蛋白质组学的平行液相色谱分离
J Am Soc Mass Spectrom. 2025 Jul 30. doi: 10.1021/jasms.5c00207.
5
Thin-diaPASEF: diaPASEF for maximizing proteome coverage in single-shot proteomics.薄直径PASEF:用于在单次蛋白质组学中最大化蛋白质组覆盖范围的直径PASEF。
DNA Res. 2025 Jul 4;32(4). doi: 10.1093/dnares/dsaf019.
6
Proteomic landscape of Alzheimer's disease: emerging technologies, advances and insights (2021 - 2025).阿尔茨海默病的蛋白质组学全景:新兴技术、进展与见解(2021 - 2025年)
Mol Neurodegener. 2025 Jul 14;20(1):83. doi: 10.1186/s13024-025-00874-5.
7
Decoding RNA-Protein Interactions: Methodological Advances and Emerging Challenges.解码RNA-蛋白质相互作用:方法学进展与新出现的挑战
Adv Genet (Hoboken). 2025 May 12;6(2):2500011. doi: 10.1002/ggn2.202500011. eCollection 2025 Jun.
8
The evolution of analytical techniques for multiplex analysis of protein biomarkers.用于蛋白质生物标志物多重分析的分析技术的演变
Expert Rev Proteomics. 2025 Jul;22(7):255-272. doi: 10.1080/14789450.2025.2529185. Epub 2025 Jul 10.
9
A transformer model for de novo sequencing of data-independent acquisition mass spectrometry data.一种用于数据非依赖采集质谱数据从头测序的变压器模型。
Nat Methods. 2025 Jul;22(7):1447-1453. doi: 10.1038/s41592-025-02718-y. Epub 2025 Jul 1.
10
Identification of protein biomarker candidates associated with organ-specific immune-related toxicity and response to management by plasma proteomics.通过血浆蛋白质组学鉴定与器官特异性免疫相关毒性及管理反应相关的蛋白质生物标志物候选物。
BMJ Oncol. 2025 Jun 6;4(1):e000696. doi: 10.1136/bmjonc-2024-000696. eCollection 2025.
功能不同的 BMP1 同种型在非小细胞肺癌患者和对照者的血浆中丰度表现出相反的模式。
PLoS One. 2023 Mar 29;18(3):e0282821. doi: 10.1371/journal.pone.0282821. eCollection 2023.
4
Sampling the proteome by emerging single-molecule and mass spectrometry methods.新兴的单分子和质谱技术对蛋白质组的采样。
Nat Methods. 2023 Mar;20(3):339-346. doi: 10.1038/s41592-023-01802-5.
5
Synchro-PASEF Allows Precursor-Specific Fragment Ion Extraction and Interference Removal in Data-Independent Acquisition.同步全扫描-平行反应监测允许在数据非依赖采集模式下进行前体离子特异性碎裂离子提取和干扰去除。
Mol Cell Proteomics. 2023 Feb;22(2):100489. doi: 10.1016/j.mcpro.2022.100489. Epub 2022 Dec 22.
6
Rapid and In-Depth Coverage of the (Phospho-)Proteome With Deep Libraries and Optimal Window Design for dia-PASEF.采用深文库和最优窗口设计进行 dia-PASEF,快速深入地覆盖(磷酸化)蛋白质组。
Mol Cell Proteomics. 2022 Sep;21(9):100279. doi: 10.1016/j.mcpro.2022.100279. Epub 2022 Aug 6.
7
Biomarker Candidates for Tumors Identified from Deep-Profiled Plasma Stem Predominantly from the Low Abundant Area.从低丰度区深度分析的血浆干细胞中鉴定出的肿瘤候选生物标志物。
J Proteome Res. 2022 Jul 1;21(7):1718-1735. doi: 10.1021/acs.jproteome.2c00122. Epub 2022 May 23.
8
Understudied proteins: opportunities and challenges for functional proteomics.研究不足的蛋白质:功能蛋白质组学面临的机遇与挑战
Nat Methods. 2022 Jul;19(7):774-779. doi: 10.1038/s41592-022-01454-x.
9
Single-Shot 10K Proteome Approach: Over 10,000 Protein Identifications by Data-Independent Acquisition-Based Single-Shot Proteomics with Ion Mobility Spectrometry.单-shot 10K 蛋白质组学方法:基于数据非依赖采集的单-shot 蛋白质组学和离子淌度质谱技术可实现超过 10000 种蛋白质的鉴定。
J Proteome Res. 2022 Jun 3;21(6):1418-1427. doi: 10.1021/acs.jproteome.2c00023. Epub 2022 May 6.
10
Characterization and modulation of surface charges to enhance extracellular vesicle isolation in plasma.表征和调节表面电荷以增强血浆中外泌体的分离。
Theranostics. 2022 Jan 31;12(5):1988-1998. doi: 10.7150/thno.69094. eCollection 2022.