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SARS-CoV-2 RNA 和核衣壳浓度在 INSTAND 外部质量评估方案中使用样本的相关性。

Correlation of SARS-CoV-2 RNA and nucleocapsid concentrations in samples used in INSTAND external quality assessment schemes.

机构信息

Physikalisch-Technische Bundesanstalt, Department 8.3 - Biomedical Optics Abbestr. 2-12, D-10587, Berlin, Germany.

INSTAND e.V, Society for Promoting Quality Assurance in Medical Laboratories, Duesseldorf, North Rhine-Westphalia, Germany.

出版信息

BMC Res Notes. 2023 Sep 11;16(1):210. doi: 10.1186/s13104-023-06497-7.

DOI:10.1186/s13104-023-06497-7
PMID:37697348
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10496272/
Abstract

OBJECTIVE

In routine clinical laboratories, severe acute respiratory syndrome coronavirus (SARS-CoV-2) infection is determined by reverse-transcription PCR (RT-PCR). In the COVID pandemic, a wide range of antigen detection tests were also in high demand. We investigated the correlation between SARS-CoV-2 NCap antigen and N gene concentration by analyzing samples from several INSTAND external quality assessment (EQA) schemes starting in March 2021. The absolute N gene concentration was measured using reverse transcriptase digital PCR (RT-dPCR) as reference value. Moreover, the performance of five commercial ELISA tests using an EQA inactivated SARS-CoV-2 sample at different concentrations was assessed on the basis of these reference values.

RESULTS

Quantitative ELISA and RT-dPCR results showed a good correlation between SARS-CoV-2 NCap antigen and RNA concentration, but this correlation varies among SARS-CoV-2 isolates. A direct correlation between SARS-CoV-2 NCap antigen concentration and genome concentration should not be generally assumed.

CONCLUSION

Further correlation studies between SARS-CoV-2 RNA and NCap antigen concentrations are needed, particularly in clinical samples and for emerging SARS-CoV-2 variants, to support the monitoring and improvement of antigen testing.

摘要

目的

在常规临床实验室中,通过逆转录聚合酶链反应(RT-PCR)来确定严重急性呼吸综合征冠状病毒(SARS-CoV-2)感染。在 COVID 大流行期间,抗原检测也有很高的需求。我们通过分析从 2021 年 3 月开始的多个 INSTAND 外部质量评估(EQA)计划的样本,研究了 SARS-CoV-2 NCap 抗原和 N 基因浓度之间的相关性。使用逆转录数字 PCR(RT-dPCR)作为参考值来测量绝对 N 基因浓度。此外,还根据这些参考值评估了五种商业 ELISA 测试在不同浓度的灭活 SARS-CoV-2 样本上的性能。

结果

定量 ELISA 和 RT-dPCR 结果表明 SARS-CoV-2 NCap 抗原和 RNA 浓度之间存在良好的相关性,但这种相关性在不同的 SARS-CoV-2 分离株之间存在差异。不应普遍假定 SARS-CoV-2 NCap 抗原浓度与基因组浓度之间存在直接相关性。

结论

需要进一步研究 SARS-CoV-2 RNA 和 NCap 抗原浓度之间的相关性,特别是在临床样本和新兴的 SARS-CoV-2 变体中,以支持抗原检测的监测和改进。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cf78/10496272/41d0a95f6d1f/13104_2023_6497_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cf78/10496272/4e7165e20949/13104_2023_6497_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cf78/10496272/41d0a95f6d1f/13104_2023_6497_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cf78/10496272/4e7165e20949/13104_2023_6497_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cf78/10496272/41d0a95f6d1f/13104_2023_6497_Fig2_HTML.jpg

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