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关于 的分类学研究,提出细分 、 新种、 新种和 新种。

Taxonomic considerations on with proposal of subdivision into , sp. nov., sp. nov., and sp. nov.

机构信息

Loyola University Chicago, Department of Microbiology & Immunology, Maywood IL, USA.

Loyola University Chicago, Bioinformatics Program, Chicago IL, USA.

出版信息

Int J Syst Evol Microbiol. 2023 Sep;73(9). doi: 10.1099/ijsem.0.006066.

Abstract

Average nucleotide identity analysis, based on whole genome sequences of 115 strains previously identified as , an emerging uropathogen, discriminates at least six unique genomic taxa. The whole genome analysis affords clearer species boundaries over 16S rRNA gene sequencing and traditional phenotypic approaches for the identification and phylogenetic organization of species. The newly described species can be differentiated by matrix-assisted laser desorption ionization time-of-flight analysis of protein signatures. We propose the emendation of the description of (type strain ATCC 51268 = CCUG 34223=NCFB 2893) and the names of sp. nov. (ATCC TSD-302 = DSM 115700 = CCUG 76531=NR-58630) sp. nov. (ATCC TSD-301 = DSM 115699 = CCUG 76532=NR-58629) and sp. nov. (ATCC TSD-300 = DSM 115698 = CCUG 76533=NR-58628) for three of the newly identified genomic taxa.

摘要

基于先前被鉴定为新兴尿路病原体的 115 株全基因组序列的平均核苷酸同一性分析,至少区分出六个独特的基因组分类单元。全基因组分析为 种的鉴定和系统发育组织提供了比 16S rRNA 基因测序和传统表型方法更清晰的种界。通过基质辅助激光解吸电离飞行时间分析蛋白质特征可以区分新描述的种。我们建议修正 (模式株 ATCC 51268 = CCUG 34223=NCFB 2893)的描述,并修正 sp. nov.(ATCC TSD-302 = DSM 115700 = CCUG 76531=NR-58630)、 sp. nov.(ATCC TSD-301 = DSM 115699 = CCUG 76532=NR-58629)和 sp. nov.(ATCC TSD-300 = DSM 115698 = CCUG 76533=NR-58628)三个新鉴定的基因组分类单元的名称。

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