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探索杂交牛体内感染的转录组动态变化

Exploring the Transcriptome Dynamics of In Vivo Infection in Crossbred Cattle.

作者信息

Ahlawat Sonika, Choudhary Vikas, Arora Reena, Kumar Ashish, Kaur Mandeep, Chhabra Pooja

机构信息

ICAR-National Bureau of Animal Genetic Resources, Karnal 132001, Haryana, India.

Department of Animal Husbandry and Dairying, Karnal 132001, Haryana, India.

出版信息

Genes (Basel). 2023 Aug 22;14(9):1663. doi: 10.3390/genes14091663.

DOI:10.3390/genes14091663
PMID:37761803
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10530335/
Abstract

The molecular changes occurring in the host in response to in vivo parasitic infection are not well understood. Therefore, the present study investigated the differential expression profiles of peripheral blood mononuclear cells (PBMCs) across -infected and non-infected crossbred cows. The differential expression profiles from PBMCs of infected and non-infected crossbred cows were generated by RNA sequencing. A marked difference in the expression of genes associated with innate immunity (, , ) was observed between the two groups. The over-represented pathways in -infected cows were associated with the immune system and regulation of the mitotic cycle. Enriched genes and pathways in non-infected animals were associated with the maintenance of chromatin integrity and cell structure. The highly connected genes identified in this study form potential candidates for further investigation into host-parasite interactions in cattle. An improved understanding of the transcriptomic dynamics during theileriosis would lead to underpinning molecular level differences related to the health status of cattle.

摘要

宿主对体内寄生虫感染所发生的分子变化尚未得到充分了解。因此,本研究调查了感染和未感染杂交奶牛外周血单个核细胞(PBMCs)的差异表达谱。通过RNA测序生成了感染和未感染杂交奶牛PBMCs的差异表达谱。两组之间观察到与固有免疫相关基因( 、 、 )表达的显著差异。感染奶牛中过度表达的通路与免疫系统和有丝分裂周期调控有关。未感染动物中富集的基因和通路与染色质完整性和细胞结构的维持有关。本研究中鉴定出的高度连接基因构成了进一步研究牛宿主-寄生虫相互作用的潜在候选对象。更好地理解泰勒虫病期间的转录组动态变化将有助于确定与牛健康状况相关的分子水平差异。

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本文引用的文献

1
Bioinformatic Evidence Reveals that Cell Cycle Correlated Genes Drive the Communication between Tumor Cells and the Tumor Microenvironment and Impact the Outcomes of Hepatocellular Carcinoma.生物信息学证据表明,细胞周期相关基因驱动肿瘤细胞与肿瘤微环境之间的通讯,并影响肝细胞癌的结局。
Biomed Res Int. 2021 Oct 26;2021:4092635. doi: 10.1155/2021/4092635. eCollection 2021.
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Proteomics Mapping of the ISGylation Landscape in Innate Immunity.先天免疫中 ISGylation 景观的蛋白质组学图谱。
Front Immunol. 2021 Aug 10;12:720765. doi: 10.3389/fimmu.2021.720765. eCollection 2021.
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Identification of Hub Genes and Their Correlation With Immune Infiltration Cells in Hepatocellular Carcinoma Based on GEO and TCGA Databases.
基于GEO和TCGA数据库的肝细胞癌中枢纽基因的鉴定及其与免疫浸润细胞的相关性
Front Genet. 2021 Apr 30;12:647353. doi: 10.3389/fgene.2021.647353. eCollection 2021.
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's Strategies and Effector Mechanisms for Host Cell Transformation: From Invasion to Immortalization.宿主细胞转化的策略与效应机制:从入侵到永生化
Front Cell Dev Biol. 2021 Apr 20;9:662805. doi: 10.3389/fcell.2021.662805. eCollection 2021.
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ISG15 Connects Autophagy and IFN-γ-Dependent Control of Toxoplasma gondii Infection in Human Cells.ISG15 连接自噬和 IFN-γ 依赖的人细胞内弓形虫感染的控制。
mBio. 2020 Oct 6;11(5):e00852-20. doi: 10.1128/mBio.00852-20.
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The Pathophysiological Significance of Fibulin-3.纤连蛋白 3 的病理生理学意义。
Biomolecules. 2020 Sep 8;10(9):1294. doi: 10.3390/biom10091294.
7
TRIM25 upregulation by Mycobacterium tuberculosis infection promotes intracellular survival of M.tb in RAW264.7 cells.结核分枝杆菌感染上调 TRIM25,促进 RAW264.7 细胞内结核分枝杆菌的存活。
Microb Pathog. 2020 Nov;148:104456. doi: 10.1016/j.micpath.2020.104456. Epub 2020 Aug 15.
8
Ferritin: An Inflammatory Player Keeping Iron at the Core of Pathogen-Host Interactions.铁蛋白:一种炎症参与者,使铁处于病原体与宿主相互作用的核心位置 。
Microorganisms. 2020 Apr 18;8(4):589. doi: 10.3390/microorganisms8040589.
9
Theileria annulata surface protein (TaSP) is a target of cyclin-dependent kinase 1 phosphorylation in Theileria annulata-infected cells.环形泰勒虫表面蛋白(TaSP)是被环形泰勒虫感染的细胞中细胞周期蛋白依赖性激酶 1 磷酸化的靶标。
Transbound Emerg Dis. 2020 Mar;67 Suppl 1:40-55. doi: 10.1111/tbed.13458.
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Identification of Candidate Signature Genes and Key Regulators Associated With Trypanotolerance in the Sheko Breed.识别与谢科品种抗锥虫能力相关的候选特征基因和关键调控因子。
Front Genet. 2019 Nov 14;10:1095. doi: 10.3389/fgene.2019.01095. eCollection 2019.