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木质素生物合成建模:通往可再生化学品的途径。

Modeling lignin biosynthesis: a pathway to renewable chemicals.

作者信息

Rao Xiaolan, Barros Jaime

机构信息

State Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei University, Wuhan 430062, China.

Division of Plant Sciences and Interdisciplinary Plant Group, University of Missouri, Columbia, MO 65211, USA.

出版信息

Trends Plant Sci. 2024 May;29(5):546-559. doi: 10.1016/j.tplants.2023.09.011. Epub 2023 Oct 4.

DOI:10.1016/j.tplants.2023.09.011
PMID:37802691
Abstract

Plant biomass contains lignin that can be converted into high-value-added chemicals, fuels, and materials. The precise genetic manipulation of lignin content and composition in plant cells offers substantial environmental and economic benefits. However, the intricate regulatory mechanisms governing lignin formation challenge the development of crops with specific lignin profiles. Mathematical models and computational simulations have recently been employed to gain fundamental understanding of the metabolism of lignin and related phenolic compounds. This review article discusses the strategies used for modeling plant metabolic networks, focusing on the application of mathematical modeling for flux network analysis in monolignol biosynthesis. Furthermore, we highlight how current challenges might be overcome to optimize the use of metabolic modeling approaches for developing lignin-engineered plants.

摘要

植物生物质含有木质素,可将其转化为高附加值的化学品、燃料和材料。对植物细胞中木质素含量和组成进行精确的基因操作具有重大的环境和经济效益。然而,控制木质素形成的复杂调控机制给培育具有特定木质素特征的作物带来了挑战。最近,数学模型和计算模拟已被用于深入了解木质素和相关酚类化合物的代谢。本文综述了用于植物代谢网络建模的策略,重点讨论了数学建模在单木质醇生物合成通量网络分析中的应用。此外,我们强调了如何克服当前的挑战,以优化代谢建模方法在培育木质素工程植物中的应用。

相似文献

1
Modeling lignin biosynthesis: a pathway to renewable chemicals.木质素生物合成建模:通往可再生化学品的途径。
Trends Plant Sci. 2024 May;29(5):546-559. doi: 10.1016/j.tplants.2023.09.011. Epub 2023 Oct 4.
2
Metabolic engineering of novel lignin in biomass crops.生物质作物中新型木质素的代谢工程。
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3
Flux modeling for monolignol biosynthesis.木酚素生物合成的通量建模。
Curr Opin Biotechnol. 2019 Apr;56:187-192. doi: 10.1016/j.copbio.2018.12.003. Epub 2018 Dec 18.
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Mathematical modeling of monolignol biosynthesis in Populus xylem.杨树木质部愈伤木质素生物合成的数学建模。
Math Biosci. 2010 Nov;228(1):78-89. doi: 10.1016/j.mbs.2010.08.009. Epub 2010 Sep 9.
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Trends in lignin modification: a comprehensive analysis of the effects of genetic manipulations/mutations on lignification and vascular integrity.木质素修饰的趋势:对基因操作/突变对木质化和维管完整性影响的综合分析。
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Lignin valorization: improving lignin processing in the biorefinery.木质素增值利用:改善生物炼制厂中的木质素加工。
Science. 2014 May 16;344(6185):1246843. doi: 10.1126/science.1246843.
7
Altered lignin biosynthesis using biotechnology to improve lignocellulosic biofuel feedstocks.利用生物技术改变木质素生物合成,以改善木质纤维素生物燃料原料。
Plant Biotechnol J. 2014 Dec;12(9):1163-73. doi: 10.1111/pbi.12225. Epub 2014 Jul 22.
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Expression of a bacterial 3-dehydroshikimate dehydratase reduces lignin content and improves biomass saccharification efficiency.细菌3-脱氢莽草酸脱水酶的表达降低了木质素含量并提高了生物质糖化效率。
Plant Biotechnol J. 2015 Dec;13(9):1241-50. doi: 10.1111/pbi.12310. Epub 2015 Jan 13.
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Expression of a bacterial 3-dehydroshikimate dehydratase (QsuB) reduces lignin and improves biomass saccharification efficiency in switchgrass (Panicum virgatum L.).表达一种细菌的 3-脱氢莽草酸脱水酶(QsuB)可降低柳枝稷(Panicum virgatum L.)中的木质素含量,提高生物质糖化效率。
BMC Plant Biol. 2021 Jan 21;21(1):56. doi: 10.1186/s12870-021-02842-9.

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