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链霉菌属之外的稀有放线菌产生的抗生素。

Antibiotics from rare actinomycetes, beyond the genus Streptomyces.

作者信息

Parra Jonathan, Beaton Ainsley, Seipke Ryan F, Wilkinson Barrie, Hutchings Matthew I, Duncan Katherine R

机构信息

Instituto de Investigaciones Farmacéuticas (INIFAR), Facultad de Farmacia, Universidad de Costa Rica, San José 11501-2060, Costa Rica; Centro Nacional de Innovaciones Biotecnológicas (CENIBiot), CeNAT-CONARE, San José 1174-1200, Costa Rica.

John Innes Centre, Department of Molecular Microbiology, Norwich Research Park, Norwich NR4 7UH, UK.

出版信息

Curr Opin Microbiol. 2023 Dec;76:102385. doi: 10.1016/j.mib.2023.102385. Epub 2023 Oct 5.

Abstract

Throughout the golden age of antibiotic discovery, Streptomyces have been unsurpassed for their ability to produce bioactive metabolites. Yet, this success has been hampered by rediscovery. As we enter a new stage of biodiscovery, omics data and existing scientific repositories can enable informed choices on the biodiversity that may yield novel antibiotics. Here, we focus on the chemical potential of rare actinomycetes, defined as bacteria within the order Actinomycetales, but not belonging to the genus Streptomyces. They are named as such due to their less-frequent isolation under standard laboratory practices, yet there is increasing evidence to suggest these biologically diverse genera harbour considerable biosynthetic and chemical diversity. In this review, we focus on examples of successful isolation and genera that have been the focus of more concentrated biodiscovery efforts, we survey the representation of rare actinomycete taxa, compared with Streptomyces, across natural product data repositories in addition to its biosynthetic potential. This is followed by an overview of clinically useful drugs produced by rare actinomycetes and considerations for future biodiscovery efforts. There is much to learn about these underexplored taxa, and mounting evidence suggests that they are a fruitful avenue for the discovery of novel antimicrobials.

摘要

在抗生素发现的黄金时代,链霉菌在产生生物活性代谢物的能力方面一直无与伦比。然而,这种成功受到了重新发现的阻碍。随着我们进入生物发现的新阶段,组学数据和现有的科学知识库能够为可能产生新型抗生素的生物多样性做出明智的选择。在这里,我们关注稀有放线菌的化学潜力,稀有放线菌被定义为放线菌目内但不属于链霉菌属的细菌。它们之所以被这样命名,是因为在标准实验室操作下它们的分离频率较低,但越来越多的证据表明,这些生物学上多样的属具有相当大的生物合成和化学多样性。在这篇综述中,我们重点介绍成功分离的例子以及那些成为更集中的生物发现努力焦点的属,我们调查了稀有放线菌类群与链霉菌相比在天然产物数据存储库中的代表性,以及它们的生物合成潜力。接下来是对稀有放线菌产生的临床有用药物的概述以及对未来生物发现努力的考虑。关于这些未被充分探索的类群有很多需要了解的,越来越多的证据表明它们是发现新型抗菌药物的富有成果的途径。

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