Raj Rishi, Kannath Santhosh Kumar, Mathew Jimson, Sylaja P N
Department of Computer Science and Engineering, Indian Institute of Technology Patna, Patna, India.
Department of Imaging Sciences and Interventional Radiology, Sree Chitra Tirunal Institute for Medical Sciences and Technology, Trivandrum, Kerala, India.
Front Neurol. 2023 Sep 28;14:1259958. doi: 10.3389/fneur.2023.1259958. eCollection 2023.
Automated machine learning or autoML has been widely deployed in various industries. However, their adoption in healthcare, especially in clinical settings is constrained due to a lack of clear understanding and explainability. The aim of this study is to utilize autoML for the prediction of functional outcomes in patients who underwent mechanical thrombectomy and compare it with traditional ML models with a focus on the explainability of the trained models.
A total of 156 patients of acute ischemic stroke with Large Vessel Occlusion (LVO) who underwent mechanical thrombectomy within 24 h of stroke onset were included in the study. A total of 34 treatment variables including clinical, demographic, imaging, and procedure-related data were extracted. Various conventional machine learning models such as decision tree classifier, logistic regression, random forest, kNN, and SVM as well as various autoML models such as AutoGluon, MLJAR, Auto-Sklearn, TPOT, and H2O were used to predict the modified Rankin score (mRS) at the time of patient discharge and 3 months follow-up. The sensitivity, specificity, accuracy, and AUC for traditional ML and autoML models were compared.
The autoML models outperformed the traditional ML models. For the prediction of mRS at discharge, the highest testing accuracy obtained by traditional ML models for the decision tree classifier was 74.11%, whereas for autoML which was obtained through AutoGluon, it showed an accuracy of 88.23%. Similarly, for mRS at 3 months, the highest testing accuracy of traditional ML was that of the SVM classifier at 76.5%, whereas that of autoML was 85.18% obtained through MLJAR. The 24-h ASPECTS score was the most important predictor for mRS at discharge whereas for prediction of mRS at 3 months, the most important factor was mRS at discharge.
Automated machine learning models based on multiple treatment variables can predict the functional outcome in patients more accurately than traditional ML models. The ease of clinical coding and deployment can assist clinicians in the critical decision-making process. We have developed a demo application which can be accessed at https://mrs-score-calculator.onrender.com/.
自动化机器学习(AutoML)已在各个行业广泛应用。然而,由于缺乏清晰的理解和可解释性,其在医疗保健领域,尤其是临床环境中的应用受到限制。本研究的目的是利用AutoML预测接受机械取栓治疗患者的功能结局,并将其与传统机器学习模型进行比较,重点关注训练模型的可解释性。
本研究纳入了156例急性缺血性卒中伴大血管闭塞(LVO)且在卒中发作24小时内接受机械取栓治疗的患者。共提取了34个治疗变量,包括临床、人口统计学、影像学和与手术相关的数据。使用各种传统机器学习模型,如决策树分类器、逻辑回归、随机森林、k近邻(kNN)和支持向量机(SVM),以及各种AutoML模型,如AutoGluon、MLJAR、Auto-Sklearn、TPOT和H2O,来预测患者出院时和3个月随访时的改良Rankin量表评分(mRS)。比较了传统机器学习模型和AutoML模型的敏感性、特异性、准确性和曲线下面积(AUC)。
AutoML模型优于传统机器学习模型。对于出院时mRS的预测,传统机器学习模型中决策树分类器获得的最高测试准确率为74.11%,而通过AutoGluon获得的AutoML模型准确率为88.23%。同样,对于3个月时的mRS,传统机器学习的最高测试准确率是支持向量机分类器的76.5%,而AutoML通过MLJAR获得的准确率为85.18%。24小时的ASPECTS评分是出院时mRS的最重要预测因素,而对于3个月时mRS的预测,最重要的因素是出院时的mRS。
基于多个治疗变量的自动化机器学习模型比传统机器学习模型能更准确地预测患者的功能结局。临床编码和部署的简便性可协助临床医生进行关键决策。我们开发了一个演示应用程序,可通过https://mrs-score-calculator.onrender.com/访问。