Schar Daniel, Zhang Zhenyu, Pires Joao, Vrancken Bram, Suchard Marc A, Lemey Philippe, Ip Margaret, Gilbert Marius, Van Boeckel Thomas, Dellicour Simon
Spatial Epidemiology Laboratory, Université Libre de Bruxelles, Brussels, Belgium.
Department of Biostatistics, Fielding School of Public Health, University of California, Los Angeles, Los Angeles, CA, United States of America.
PLOS Glob Public Health. 2023 Oct 19;3(10):e0002454. doi: 10.1371/journal.pgph.0002454. eCollection 2023.
Human group B Streptococcus (GBS) infections attributable to an invasive, hypervirulent sequence type (ST) 283 have been associated with freshwater fish consumption in Asia. The origin, geographic dispersion pathways and host transitions of GBS ST283 remain unresolved. We gather 328 ST283 isolate whole-genome sequences collected from humans and fish between 1998 and 2021, representing eleven countries across four continents. We apply Bayesian phylogeographic analyses to reconstruct the dispersal history of ST283 and combine ST283 phylogenies with genetic markers and host association to investigate host switching and the gain and loss of antimicrobial resistance and virulence factor genes. Initial dispersal within Asia followed ST283 emergence in the early 1980s, with Singapore, Thailand and Hong Kong observed as early transmission hubs. Subsequent intercontinental dispersal originating from Vietnam began in the decade commencing 2001, demonstrating ST283 holds potential to expand geographically. Furthermore, we observe bidirectional host switching, with the detection of more frequent human-to-fish than fish-to-human transitions, suggesting that sound wastewater management, hygiene and sanitation may help to interrupt chains of transmission between hosts. We also show that antimicrobial resistance and virulence factor genes were lost more frequently than gained across the evolutionary history of ST283. Our findings highlight the need for enhanced surveillance, clinical awareness, and targeted risk mitigation to limit transmission and reduce the impact of an emerging pathogen associated with a high-growth aquaculture industry.
在亚洲,侵袭性、高毒力序列型(ST)283的人类B族链球菌(GBS)感染与食用淡水鱼有关。GBS ST283的起源、地理扩散途径和宿主转换仍未明确。我们收集了1998年至2021年间从人类和鱼类中分离出的328个ST283全基因组序列,这些序列来自四大洲的11个国家。我们应用贝叶斯系统地理学分析来重建ST283的传播历史,并将ST283系统发育与遗传标记和宿主关联相结合,以研究宿主转换以及抗菌药物耐药性和毒力因子基因的获得与丧失。20世纪80年代初ST283出现后,首先在亚洲内部传播,新加坡、泰国和香港被视为早期传播中心。随后,始于越南的洲际传播始于2001年开始的十年间,表明ST283有在地理上扩张的潜力。此外,我们观察到双向宿主转换,发现从人类到鱼类的转换比从鱼类到人类的转换更频繁,这表明合理的废水管理、卫生和环境卫生可能有助于中断宿主之间的传播链。我们还表明,在ST283的进化历史中,抗菌药物耐药性和毒力因子基因的丧失比获得更频繁。我们的研究结果强调,需要加强监测、提高临床意识并针对性地降低风险,以限制传播并减少与高增长水产养殖业相关的新兴病原体的影响。