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在不同温度胁迫下. 中可及染色质景观和转录组的特征。

Characteristics of the Accessible Chromatin Landscape and Transcriptome under Different Temperature Stresses in .

机构信息

State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, China.

Department of Basic Medicine, Changzhi Medical College, Changzhi 046000, China.

出版信息

Genes (Basel). 2023 Oct 23;14(10):1978. doi: 10.3390/genes14101978.

Abstract

is an important invasive pest with worldwide distribution and strong temperature tolerance. Previous studies have shown that temperature tolerance varies significantly between the different invasive populations. Several key factors involved in epigenetic regulation have been identified and verified in ; therefore, epigenetic adaptation mechanisms may also exist. This study aimed to detect changes in the chromatin accessibility landscape and genome-wide transcriptome under different temperature stresses in . Assay for transposase-accessible chromatin with high-throughput sequencing and RNA-seq analyses indicated that transcriptional activity of the genes strongly correlates with chromatin accessibility. Chromatin transcription-activated gene expression regulation is dominant during high-temperature stress in , mainly through the transcriptional repression of genes related to low-temperature stress resistance. Furthermore, resists low-temperature stress by regulating enzyme activities and withstands high-temperature stress by regulating metabolism and synthesis of organic substances, both achieved by altering chromatin accessibility. In summary, this study provides a theoretical basis for exploring changes in gene expression and chromatin accessibility under different temperature stresses, offering a new approach to unravelling regulatory mechanisms underlying the onset of molecular regulation in response to various temperature stress conditions.

摘要

是一种具有全球分布和较强温度耐受性的重要入侵害虫。先前的研究表明,不同入侵种群之间的温度耐受性存在显著差异。已经在 中鉴定和验证了涉及表观遗传调控的几个关键因素;因此,可能也存在表观遗传适应机制。本研究旨在检测 在不同温度胁迫下染色质可及性景观和全基因组转录组的变化。利用转座酶可及染色质的高通量测序和 RNA-seq 分析表明,基因的转录活性与染色质可及性强烈相关。在高温胁迫下,染色质转录激活基因表达调控占主导地位,主要通过对低温胁迫抗性相关基因的转录抑制来实现。此外, 通过调节酶活性来抵抗低温胁迫,通过调节有机物质的代谢和合成来承受高温胁迫,这两种方式都是通过改变染色质可及性来实现的。总之,本研究为探索不同温度胁迫下基因表达和染色质可及性的变化提供了理论依据,为探索应对各种温度胁迫条件下分子调控起始的调控机制提供了新的途径。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af6d/10606294/2db09924fad4/genes-14-01978-g001.jpg

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