Department of Biology, Washington University in St. Louis, St. Louis, Missouri, USA.
Mol Ecol. 2024 Jan;33(1):e17193. doi: 10.1111/mec.17193. Epub 2023 Nov 3.
Mammalian gut microbial communities are frequently found to be host-specific-microbial community compositions are more similar within than between host species-and some individual microbial taxa consistently associate with a single or small set of host species. The ecoevolutionary dynamics that result in this pattern of phylosymbiosis or host specificity have been proposed, but robust tests of the mechanisms driving these relationships are lacking. In this issue of Molecular Ecology, Mazel et al. (2023) combine large amplicon sequencing data sets with bacterial phenotypic traits to test whether microbial dispersal patterns contribute to the host specificity of the gut microbiome. They find that both transmission mode and oxygen tolerance are predictive of how specialized a microbe is. Horizontally transmitted, oxygen-tolerant microbes are more likely to be generalists, and vertically transmitted anaerobes are more likely to be limited to a few host species. This creative use of publicly available data provides a roadmap for testing hypotheses about the mechanisms underlying phylosymbiosis.
哺乳动物肠道微生物群落通常具有宿主特异性——微生物群落组成在宿主种内比种间更为相似,并且一些特定的微生物类群始终与单个或少数宿主物种相关联。导致这种共生或宿主特异性模式的生态进化动态已经被提出,但缺乏对驱动这些关系的机制的有力测试。在本期《分子生态学》中,Mazel 等人(2023 年)将大型扩增子测序数据集与细菌表型特征相结合,以测试微生物传播模式是否有助于肠道微生物组的宿主特异性。他们发现,无论是传播方式还是耐氧性都可以预测微生物的专业化程度。水平传播、耐氧的微生物更有可能是广生种,而垂直传播的厌氧菌更可能局限于少数宿主物种。这种对公开可用数据的创造性使用为测试关于共生关系机制的假设提供了路线图。
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