Institute of Systems, Molecular and Integrative Biology, University of Liverpool, Crown Street, Liverpool L69 7ZB, UK.
IQVIA Ltd., The Point, 37 North Wharf Road, London W2 1AF, UK.
Nucleic Acids Res. 2024 Jan 5;52(D1):D1-D9. doi: 10.1093/nar/gkad1173.
The 2024 Nucleic Acids Research database issue contains 180 papers from across biology and neighbouring disciplines. There are 90 papers reporting on new databases and 83 updates from resources previously published in the Issue. Updates from databases most recently published elsewhere account for a further seven. Nucleic acid databases include the new NAKB for structural information and updates from Genbank, ENA, GEO, Tarbase and JASPAR. The Issue's Breakthrough Article concerns NMPFamsDB for novel prokaryotic protein families and the AlphaFold Protein Structure Database has an important update. Metabolism is covered by updates from Reactome, Wikipathways and Metabolights. Microbes are covered by RefSeq, UNITE, SPIRE and P10K; viruses by ViralZone and PhageScope. Medically-oriented databases include the familiar COSMIC, Drugbank and TTD. Genomics-related resources include Ensembl, UCSC Genome Browser and Monarch. New arrivals cover plant imaging (OPIA and PlantPAD) and crop plants (SoyMD, TCOD and CropGS-Hub). The entire Database Issue is freely available online on the Nucleic Acids Research website (https://academic.oup.com/nar). Over the last year the NAR online Molecular Biology Database Collection has been updated, reviewing 1060 entries, adding 97 new resources and eliminating 388 discontinued URLs bringing the current total to 1959 databases. It is available at http://www.oxfordjournals.org/nar/database/c/.
2024 年《核酸研究》数据库专刊收录了来自生物学及相关学科的 180 篇论文。其中 90 篇报告了新数据库，83 篇是数据库更新，这些更新资源此前已在该专刊中发布。另有 7 篇来自数据库更新，这些数据库最近在其他地方发布。核酸数据库包括新的 NAKB（用于结构信息）和 Genbank、ENA、GEO、Tarbase 和 JASPAR 的更新。该专刊的突破性文章是关于新型原核蛋白家族的 NMPFamsDB，AlphaFold 蛋白结构数据库也有重要更新。Reactome、Wikipathways 和 Metabolights 提供了代谢更新。RefSeq、UNITE、SPIRE 和 P10K 涵盖了微生物，ViralZone 和 PhageScope 涵盖了病毒。与医学相关的数据库包括熟悉的 COSMIC、Drugbank 和 TTD。基因组学相关资源包括 Ensembl、UCSC Genome Browser 和 Monarch。新加入的有植物成像（OPIA 和 PlantPAD）和作物植物（SoyMD、TCOD 和 CropGS-Hub）。整个数据库专刊可在《核酸研究》网站（https://academic.oup.com/nar）上免费在线获取。在过去的一年里，《核酸研究》在线分子生物学数据库专刊进行了更新，共审查了 1060 条条目，增加了 97 个新资源，删除了 388 个已停止使用的 URL，目前总共有 1959 个数据库。可在 http://www.oxfordjournals.org/nar/database/c/ 上获取。
