从植物病原菌立枯丝核菌中分离到一种新型内生病毒的特性研究。
Characterization of a novel endornavirus isolated from the phytopathogenic fungus Rhizoctonia solani.
机构信息
Institute of Vegetable Research, Wuhan Academy of Agricultural Sciences, Wuhan, 430045, Hubei, China.
出版信息
Arch Virol. 2024 Jan 2;169(1):15. doi: 10.1007/s00705-023-05915-2.
Rhizoctonia solani endornavirus 8 (RsEV8) was isolated from strain XY175 of Rhizoctonia solani AG-1 IA. The full-length genome of RsEV8 is 16,147 nucleotides (nt) in length and contains a single open reading frame that encodes a large polyprotein of 5227 amino acids. The polyprotein contains four conserved domains: viral methyltransferase, putative DEAH box helicase, viral helicase, and RNA-dependent RNA polymerase (RdRp). RsEV8 has a shorter 3'-UTR (58 nt) and a longer 5'-UTR (404 nt). A multiple sequence alignment indicated that the RdRp of RsEV8 possesses eight typical RdRp motifs. According to a BLASTp analysis, RsEV8 shares 39.31% sequence identity with Rhizoctonia cerealis endornavirus-1084-7. Phylogenetic analysis demonstrated that RsEV8 clusters with members of the genus Betaendornavirus.
茄丝核菌内禀病毒 8(RsEV8)是从茄丝核菌 AG-1 IA 菌株 XY175 中分离得到的。RsEV8 的全长基因组为 16147 个核苷酸(nt),包含一个单一的开放阅读框,编码 5227 个氨基酸的大聚合蛋白。该聚合蛋白包含四个保守结构域:病毒甲基转移酶、假定的 DEAH 盒解旋酶、病毒解旋酶和 RNA 依赖性 RNA 聚合酶(RdRp)。RsEV8 具有较短的 3'-UTR(58nt)和较长的 5'-UTR(404nt)。多重序列比对表明,RsEV8 的 RdRp 具有 8 个典型的 RdRp 基序。根据 BLASTp 分析,RsEV8 与禾旋孢腔菌内禀病毒-1084-7 共享 39.31%的序列同一性。系统发育分析表明,RsEV8 与贝塔内禀病毒属的成员聚类在一起。