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甜樱桃 TCP 基因家族分析揭示 PavTCP1、PavTCP2 和 PavTCP3 在果实光响应中的潜在功能。

Sweet cherry TCP gene family analysis reveals potential functions of PavTCP1, PavTCP2 and PavTCP3 in fruit light responses.

机构信息

College of Horticulture, Sichuan Agricultural University, Chengdu, 6111130, China.

出版信息

BMC Genomics. 2024 Jan 2;25(1):3. doi: 10.1186/s12864-023-09923-z.

Abstract

BACKGROUND

TCP proteins are plant specific transcription factors that play important roles in plant growth and development. Despite the known significance of these transcription factors in general plant development, their specific role in fruit growth remains largely uncharted. Therefore, this study explores the potential role of TCP transcription factors in the growth and development of sweet cherry fruits.

RESULTS

Thirteen members of the PavTCP family were identified within the sweet cherry plant, with two, PavTCP1 and PavTCP4, found to contain potential target sites for Pav-miR159, Pav-miR139a, and Pav-miR139b-3p. Analyses of cis-acting elements and Arabidopsis homology prediction analyses that the PavTCP family comprises many light-responsive elements. Homologs of PavTCP1 and PavTCP3 in Arabidopsis TCP proteins were found to be crucial to light responses. Shading experiments showed distinct correlation patterns between PavTCP1, 2, and 3 and total anthocyanins, soluble sugars, and soluble solids in sweet cherry fruits. These observations suggest that these genes may contribute significantly to sweet cherry light responses. In particular, PavTCP1 could play a key role, potentially mediated through Pav-miR159, Pav-miR139a, and Pav-miR139b-3p.

CONCLUSION

This study is the first to unveil the potential function of TCP transcription factors in the light responses of sweet cherry fruits, paving the way for future investigations into the role of this transcription factor family in plant fruit development.

摘要

背景

TCP 蛋白是植物特有的转录因子,在植物生长发育中发挥着重要作用。尽管这些转录因子在一般植物发育中具有已知的重要性,但它们在果实生长中的具体作用在很大程度上仍未被探索。因此,本研究探讨了 TCP 转录因子在甜樱桃果实生长和发育中的潜在作用。

结果

在甜樱桃植物中鉴定出 13 个 PavTCP 家族成员,其中 2 个,PavTCP1 和 PavTCP4,被发现含有 Pav-miR159、Pav-miR139a 和 Pav-miR139b-3p 的潜在靶位点。顺式作用元件分析和拟南芥同源性预测分析表明,PavTCP 家族包含许多光响应元件。拟南芥 TCP 蛋白中的 PavTCP1 和 PavTCP3 的同源物被发现对光反应至关重要。遮荫实验显示,PavTCP1、2 和 3 与甜樱桃果实中的总花青素、可溶性糖和可溶性固形物之间存在明显的相关模式。这些观察结果表明,这些基因可能对甜樱桃的光反应有重要贡献。特别是 PavTCP1 可能通过 Pav-miR159、Pav-miR139a 和 Pav-miR139b-3p 发挥关键作用。

结论

本研究首次揭示了 TCP 转录因子在甜樱桃果实光反应中的潜在功能,为进一步研究该转录因子家族在植物果实发育中的作用铺平了道路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b72c/10759647/8ad762decea8/12864_2023_9923_Fig1_HTML.jpg

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