Weeramange Chamitha, Menjivar Cindy, O'Neil Pierce T, El Qaidi Samir, Harrison Kelly S, Meinhardt Sarah, Bird Cole L, Sreenivasan Shwetha, Hardwidge Philip R, Fenton Aron W, Hefty P Scott, Bose Jeffrey L, Swint-Kruse Liskin
The Department of Biochemistry and Molecular Biology, 3901 Rainbow Blvd, MSN 3030, The University of Kansas Medical Center, Kansas City, Kansas, USA 66160.
The Department of Microbiology, Molecular Genetics and Immunology, 3901 Rainbow Blvd, MSN 3029, The University of Kansas Medical Center, Kansas City, Kansas, USA 66160.
bioRxiv. 2023 Dec 14:2023.12.14.571569. doi: 10.1101/2023.12.14.571569.
In , the master transcription regulator Catabolite Repressor Activator (Cra) regulates >100 genes in central metabolism. Cra binding to DNA is allosterically regulated by binding to fructose-1-phosphate (F-1-P), but the only documented source of F-1-P is from the concurrent import and phosphorylation of exogenous fructose. Thus, many have proposed that fructose-1,6-bisphosphate (F-1,6-BP) is also a physiological regulatory ligand. However, the role of F-1,6-BP has been widely debated. Here, we report that the enzyme fructose-1-kinase (FruK) can carry out its "reverse" reaction under physiological substrate concentrations to generate F-1-P from F-1,6-BP. We further show that FruK directly binds Cra with nanomolar affinity and forms higher order, heterocomplexes. Growth assays with a Δ strain and complementation show that FruK has a broader role in metabolism than fructose catabolism. The Δ strain also alters biofilm formation. Since itself is repressed by Cra, these newly-reported events add layers to the dynamic regulation of central metabolism that occur in response to changing nutrients. These findings might have wide-spread relevance to other γ-proteobacteria, which conserve both Cra and FruK.
在[具体情况未提及]中,主转录调节因子分解代谢物阻遏激活蛋白(Cra)调控着中心代谢中超过100个基因。Cra与DNA的结合通过与1-磷酸果糖(F-1-P)结合而受到变构调节,但唯一有记录的F-1-P来源是外源果糖的同时导入和磷酸化。因此,许多人提出1,6-二磷酸果糖(F-1,6-BP)也是一种生理调节配体。然而,F-1,6-BP的作用一直存在广泛争议。在此,我们报告果糖-1-激酶(FruK)能够在生理底物浓度下进行其“逆向”反应,从F-1,6-BP生成F-1-P。我们进一步表明,FruK以纳摩尔亲和力直接结合Cra并形成高阶异源复合物。用Δ菌株进行的生长试验和互补实验表明,FruK在代谢中的作用比果糖分解代谢更广泛。Δ菌株也改变了生物膜的形成。由于[具体内容未明确]本身受到Cra的抑制,这些新报道的事件为响应营养变化而发生的中心代谢动态调节增加了层次。这些发现可能与其他保守有Cra和FruK的γ-变形菌广泛相关。