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酵母优先选择各种 DNA 选项,通过同源重组修复基因组断裂。

The priority of yeast to select among various DNA options to repair genome breaks by homologous recombination.

机构信息

Department of Molecular Biology and Genetics, Faculty of Arts and Sciences, Bingol University, 12000, Bingol, Turkey.

Department of Life Sciences, Chalmers University of Technology, Kemivägen 10, 412 96, Gothenburg, Sweden.

出版信息

Mol Biol Rep. 2024 Jan 11;51(1):99. doi: 10.1007/s11033-023-09058-0.

Abstract

BACKGROUND

Horizontal gene transfer (HGT) is considered an important mechanism to contribute to the evolution of bacteria, plants, and animals by allowing the movement of genetic material between organisms, in difference to vertical inheritance. Thereby it can also play a significant role in spreading traits like antibiotic resistance among bacteria and virulence factors between pathogens. During the HGT, organisms take up free DNA from the environment and incorporate it into their genomes. Although HGT is known to be carried out by many organisms, there is limited information on how organisms select which genetic material for horizontal transfer. Here we have investigated the preference priority of Saccharomyces cerevisiae between different options of gene source presented under certain stress conditions to repair a double-strand break (DSB) in DNA via HR.

RESULTS

Each genetic module was designed with appropriate sequences being homologous for two sides of the DSB, which is important for yeast to repair the fracture with HR. S. cerevisiae made a random selection between two heterologous T1 (44%) and T2 (56%) modules to repair DSB. Interestingly, yeast corrected the DNA break only with the T3 module (almost 100%) when the homologous T3 module was an option for the selection. It seems that S. cerevisiae tends to prefer T3 over alternatives to fix DSBs when it exists among the options.

CONCLUSIONS

It seems that S. cerevisiae have a preference for priority to select a particular one under certain conditions when it has various DNA options to repair a DSB in its genome, further studies are required to support our findings.

摘要

背景

水平基因转移(HGT)被认为是细菌、植物和动物进化的一个重要机制,它允许遗传物质在生物体之间移动,与垂直遗传不同。因此,它也可以在传播抗生素耐药性等特征方面发挥重要作用细菌和病原体之间的毒力因子。在 HGT 过程中,生物体从环境中摄取游离 DNA 并将其整合到基因组中。尽管已知许多生物体都进行 HGT,但对于生物体如何选择水平转移的遗传物质知之甚少。在这里,我们研究了酿酒酵母在特定应激条件下通过 HR 修复 DNA 双链断裂(DSB)时,对不同基因源选择的优先顺序。

结果

每个遗传模块都设计有适当的序列,与 DSB 的两侧同源,这对于酵母通过 HR 修复断裂非常重要。酿酒酵母在两个异源 T1(44%)和 T2(56%)模块之间进行随机选择来修复 DSB。有趣的是,当同源 T3 模块是选择的选项之一时,酵母仅用 T3 模块修复了 DNA 断裂(几乎 100%)。似乎当 T3 模块存在于选项中时,酿酒酵母在修复其基因组中的 DSB 时更倾向于优先选择 T3 而不是其他替代物。

结论

似乎当酿酒酵母在其基因组中有多种 DNA 选项可用于修复 DSB 时,它在某些条件下对优先选择特定选项有偏好,但需要进一步研究来支持我们的发现。

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