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SLMO2 是人类泛癌的一个潜在的预后和免疫生物标志物。

SLMO2 is a potential prognostic and immunological biomarker in human pan-cancer.

机构信息

Clinical Laboratory, Hunan Aerospace Hospital, 189 Fenglin 3rd Road, Yuelu District, Changsha, 410205, Hunan, China.

School of Medicine, Jinan University, Guangzhou, 510632, Guangdong, China.

出版信息

Sci Rep. 2024 Jan 11;14(1):1070. doi: 10.1038/s41598-024-51720-5.

Abstract

SLMO2 is a lipid transporter that transports phosphatidylserine to the interior of mitochondria, also known as PRELID3B, which plays an important role in lipid metabolism. It has also been reported to be involved in the growth process of breast and lung tumors. However, its functions and underlying mechanisms in cancer progress remain elusive, and the potential as pan-cancer biomarker and therapeutic target remains unexplored. Using the TCGA project and GEO database, we performed pan-cancer analysis of SLMO2, which including the expression pattern, prognostic value, mutation landscape, methylation modification, protein-protein interaction network and the relationship between SLMO2 expression and immune infiltration. KEGG enrichment analysis was also performed to predict function and relevant cellular pathways of SLMO2. In addition, proliferation and migration assays were performed to detect the proliferation and metastasis capacity of breast cancer and lung cancer cells. In our study, we found that SLMO2 was overexpressed in pan-cancer and the elevated expression of SLMO2 was correlated with poorer prognosis. SLMO2 mutations were distributed in a variety of tumors and correlated with prognosis. Promoter methylation analysis showed that SLMO2 methylation levels were lower in most tumors compared with normal tissues, while a few tumors showed increased methylation levels of SLMO2. SLMO2 expression was also positively correlated with immune infiltration of MDSCs. Further pathway enrichment analysis indicated that SLMO2 was involved in regulating of cytoplasmic transport and other oncogenic processes. In vitro experiments have shown that SLMO2 promotes the proliferation and migration of breast cancer and lung cancer cells. In conclusion, our findings suggested that SLMO2 was a potential prognostic and immunological marker in pan-cancer. This study suggested a potential strategy for targeting SLMO2 to treat tumors, including manipulating tumor growth or the tumor microenvironment, especially the infiltration of MDSC.

摘要

SLMO2 是一种脂质转运蛋白,可将磷脂酰丝氨酸转运到线粒体内部,也称为 PRELID3B,它在脂质代谢中发挥重要作用。已有报道称其参与了乳腺癌和肺癌肿瘤的生长过程。然而,其在癌症进展中的功能和潜在机制仍不清楚,作为泛癌生物标志物和治疗靶点的潜力尚未得到探索。我们使用 TCGA 项目和 GEO 数据库对 SLMO2 进行了泛癌症分析,包括表达模式、预后价值、突变景观、甲基化修饰、蛋白质-蛋白质相互作用网络以及 SLMO2 表达与免疫浸润之间的关系。还进行了 KEGG 富集分析,以预测 SLMO2 的功能和相关细胞途径。此外,还进行了增殖和迁移实验,以检测乳腺癌和肺癌细胞的增殖和转移能力。在我们的研究中,我们发现 SLMO2 在泛癌中过表达,并且 SLMO2 的高表达与预后较差相关。SLMO2 突变分布在多种肿瘤中,与预后相关。启动子甲基化分析表明,与正常组织相比,大多数肿瘤中的 SLMO2 甲基化水平较低,而少数肿瘤显示 SLMO2 甲基化水平升高。SLMO2 表达与 MDSC 的免疫浸润呈正相关。进一步的通路富集分析表明,SLMO2 参与调节细胞质运输和其他致癌过程。体外实验表明,SLMO2 促进乳腺癌和肺癌细胞的增殖和迁移。总之,我们的研究结果表明,SLMO2 是泛癌中一种潜在的预后和免疫标志物。本研究提出了一种针对 SLMO2 治疗肿瘤的潜在策略,包括操纵肿瘤生长或肿瘤微环境,特别是 MDSC 的浸润。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0982/10784594/239b6df9b326/41598_2024_51720_Fig1_HTML.jpg

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