• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

整合生物信息学与实验验证以揭示与二硫键连接的细胞焦亡相关的长链非编码RNA作为肝细胞癌的预后生物标志物和治疗靶点

Integrating bioinformatics and experimental validation to unveil disulfidptosis-related lncRNAs as prognostic biomarker and therapeutic target in hepatocellular carcinoma.

作者信息

Xu Lixia, Chen Shu, Li Qiaoqiao, Chen Xinyi, Xu Yuan, Zhou Yongjian, Li Juan, Guo Zhixian, Xing Jiyuan, Chen Di

机构信息

Department of Infectious Diseases, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, 450052, China.

School of Basic Medical Sciences, Xinxiang Medical University, Xinxiang, Henan, 453003, China.

出版信息

Cancer Cell Int. 2024 Jan 13;24(1):30. doi: 10.1186/s12935-023-03208-x.

DOI:10.1186/s12935-023-03208-x
PMID:38218909
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10788009/
Abstract

BACKGROUND

Hepatocellular carcinoma (HCC) stands as a prevalent malignancy globally, characterized by significant morbidity and mortality. Despite continuous advancements in the treatment of HCC, the prognosis of patients with this cancer remains unsatisfactory. This study aims at constructing a disulfidoptosis‑related long noncoding RNA (lncRNA) signature to probe the prognosis and personalized treatment of patients with HCC.

METHODS

The data of patients with HCC were extracted from The Cancer Genome Atlas (TCGA) databases. Univariate, multivariate, and least absolute selection operator Cox regression analyses were performed to build a disulfidptosis-related lncRNAs (DRLs) signature. Kaplan-Meier plots were used to evaluate the prognosis of the patients with HCC. Functional enrichment analysis was used to identify key DRLs-associated signaling pathways. Spearman's rank correlation was used to elucidate the association between the DRLs signature and immune microenvironment. The function of TMCC1-AS1 in HCC was validated in two HCC cell lines (HEP3B and HEPG2).

RESULTS

We identified 11 prognostic DRLs from the TCGA dataset, three of which were selected to construct the prognostic signature of DRLs. We found that the survival time of low-risk patients was considerably longer than that of high-risk patients. We further observed that the composition and the function of immune cell subpopulations were significantly different between high- and low-risk groups. Additionally, we identified that sorafenib, 5-Fluorouracil, and doxorubicin displayed better responses in the low-score group than those in the high-score group, based on IC50 values. Finally, we confirmed that inhibition of TMCC1-AS1 impeded the proliferation, migration, and invasion of hepatocellular carcinoma cells.

CONCLUSIONS

The DRL signatures have been shown to be a reliable prognostic and treatment response indicator in HCC patients. TMCC1-AS1 showed potential as a novel prognostic biomarker and therapeutic target for HCC.

摘要

背景

肝细胞癌(HCC)是全球范围内一种常见的恶性肿瘤,具有较高的发病率和死亡率。尽管HCC治疗不断取得进展,但该癌症患者的预后仍不尽人意。本研究旨在构建一种与二硫键凋亡相关的长链非编码RNA(lncRNA)特征,以探究HCC患者的预后及个性化治疗。

方法

从癌症基因组图谱(TCGA)数据库中提取HCC患者的数据。进行单因素、多因素及最小绝对收缩和选择算子Cox回归分析,以构建与二硫键凋亡相关的lncRNAs(DRLs)特征。采用Kaplan-Meier曲线评估HCC患者的预后。功能富集分析用于识别与关键DRLs相关的信号通路。Spearman等级相关性分析用于阐明DRLs特征与免疫微环境之间的关联。在两种HCC细胞系(HEP3B和HEPG2)中验证TMCC1-AS1在HCC中的功能。

结果

我们从TCGA数据集中鉴定出11个预后DRLs,其中3个被选来构建DRLs的预后特征。我们发现低风险患者的生存时间明显长于高风险患者。我们进一步观察到高风险组和低风险组之间免疫细胞亚群的组成和功能存在显著差异。此外,基于IC50值,我们发现索拉非尼、5-氟尿嘧啶和阿霉素在低分患者组中的反应比高分患者组更好。最后,我们证实抑制TMCC1-AS1可阻碍肝癌细胞的增殖、迁移和侵袭。

结论

DRLs特征已被证明是HCC患者可靠的预后和治疗反应指标。TMCC1-AS1显示出作为HCC新型预后生物标志物和治疗靶点的潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92f7/10788009/c50940ac342e/12935_2023_3208_Fig9_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92f7/10788009/ba0bf9edbd97/12935_2023_3208_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92f7/10788009/7c455591783f/12935_2023_3208_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92f7/10788009/ccab86acd7ba/12935_2023_3208_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92f7/10788009/5145532fab54/12935_2023_3208_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92f7/10788009/9daf6d121d63/12935_2023_3208_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92f7/10788009/d5cb231ae877/12935_2023_3208_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92f7/10788009/d81e4a9f00dc/12935_2023_3208_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92f7/10788009/c3c0eace54ce/12935_2023_3208_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92f7/10788009/c50940ac342e/12935_2023_3208_Fig9_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92f7/10788009/ba0bf9edbd97/12935_2023_3208_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92f7/10788009/7c455591783f/12935_2023_3208_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92f7/10788009/ccab86acd7ba/12935_2023_3208_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92f7/10788009/5145532fab54/12935_2023_3208_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92f7/10788009/9daf6d121d63/12935_2023_3208_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92f7/10788009/d5cb231ae877/12935_2023_3208_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92f7/10788009/d81e4a9f00dc/12935_2023_3208_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92f7/10788009/c3c0eace54ce/12935_2023_3208_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/92f7/10788009/c50940ac342e/12935_2023_3208_Fig9_HTML.jpg

相似文献

1
Integrating bioinformatics and experimental validation to unveil disulfidptosis-related lncRNAs as prognostic biomarker and therapeutic target in hepatocellular carcinoma.整合生物信息学与实验验证以揭示与二硫键连接的细胞焦亡相关的长链非编码RNA作为肝细胞癌的预后生物标志物和治疗靶点
Cancer Cell Int. 2024 Jan 13;24(1):30. doi: 10.1186/s12935-023-03208-x.
2
Construction and Validation of a Reliable Disulfidptosis-Related LncRNAs Signature of the Subtype, Prognostic, and Immune Landscape in Colon Cancer.构建并验证结肠癌中与二硫键错配相关的 lncRNAs 特征用于亚型、预后和免疫图谱分析
Int J Mol Sci. 2023 Aug 18;24(16):12915. doi: 10.3390/ijms241612915.
3
A disulfidptosis-related lncRNAs signature in hepatocellular carcinoma: prognostic prediction, tumor immune microenvironment and drug susceptibility.肝细胞癌中与二硫键相关的 lncRNAs 特征:预后预测、肿瘤免疫微环境和药物敏感性。
Sci Rep. 2024 Jan 7;14(1):746. doi: 10.1038/s41598-024-51459-z.
4
Identification of a five-long non-coding RNA signature to improve the prognosis prediction for patients with hepatocellular carcinoma.鉴定五个长链非编码 RNA 标志物以改善肝细胞癌患者的预后预测。
World J Gastroenterol. 2018 Aug 14;24(30):3426-3439. doi: 10.3748/wjg.v24.i30.3426.
5
Construction of a prognostic model for disulfidptosis-related long noncoding RNAs in R0 resected hepatocellular carcinoma and analysis of their impact on malignant behavior.构建 R0 切除的肝细胞癌中与二硫键相关的长非编码 RNA 的预后模型,并分析其对恶性行为的影响。
BMC Cancer. 2024 Aug 29;24(1):1068. doi: 10.1186/s12885-024-12816-3.
6
Comprehensive Analysis of Disulfidptosis-Related LncRNAs in Molecular Classification, Immune Microenvironment Characterization and Prognosis of Gastric Cancer.胃癌分子分类、免疫微环境特征及预后中与二硫化物诱导细胞死亡相关长链非编码RNA的综合分析
Biomedicines. 2023 Nov 28;11(12):3165. doi: 10.3390/biomedicines11123165.
7
A novel disulfidptosis-related lncRNAs signature for predicting survival and immune response in hepatocellular carcinoma.一种新型与二硫键相关的 lncRNAs 特征可预测肝细胞癌的生存和免疫反应。
Aging (Albany NY). 2024 Jan 4;16(1):267-284. doi: 10.18632/aging.205367.
8
Machine learning-based disulfidptosis-related lncRNA signature predicts prognosis, immune infiltration and drug sensitivity in hepatocellular carcinoma.基于机器学习的二硫键相关 lncRNA 特征可预测肝细胞癌的预后、免疫浸润和药物敏感性。
Sci Rep. 2024 Feb 22;14(1):4354. doi: 10.1038/s41598-024-54115-8.
9
Development of a novel disulfidptosis-related lncRNA signature for prognostic and immune response prediction in clear cell renal cell carcinoma.开发一种新型的与二硫键错配相关的 lncRNA 标志物,用于预测透明细胞肾细胞癌的预后和免疫反应。
Sci Rep. 2024 Jan 5;14(1):624. doi: 10.1038/s41598-024-51197-2.
10
Constructed Risk Prognosis Model Associated with Disulfidptosis lncRNAs in HCC.构建与 HCC 中硫氧还蛋白相互作用lncRNAs 相关的风险预后模型。
Int J Mol Sci. 2023 Dec 18;24(24):17626. doi: 10.3390/ijms242417626.

引用本文的文献

1
Long non-coding RNA-based single and combination independent prognostic biomarkers for hepatocellular carcinoma.基于长链非编码RNA的肝细胞癌单因素及联合独立预后生物标志物
Discov Oncol. 2025 Sep 2;16(1):1674. doi: 10.1007/s12672-025-03309-1.
2
Multi‑cohort Validation Based on Disulfidptosis-Related lncRNAs for Predicting Prognosis and Immunotherapy Response of Esophageal Squamous Cell Carcinoma.基于二硫化物化相关长链非编码RNA的多队列验证用于预测食管鳞状细胞癌的预后和免疫治疗反应
Onco Targets Ther. 2025 Jun 25;18:763-778. doi: 10.2147/OTT.S519270. eCollection 2025.
3
Disulfidptosis in tumor progression.

本文引用的文献

1
Leveraging a disulfidptosis‑related lncRNAs signature for predicting the prognosis and immunotherapy of glioma.利用与铁死亡相关的长链非编码RNA特征预测胶质瘤的预后和免疫治疗
Cancer Cell Int. 2023 Dec 8;23(1):316. doi: 10.1186/s12935-023-03147-7.
2
N6-methyladenosine-modified oncofetal lncRNA MIR4435-2HG contributed to stemness features of hepatocellular carcinoma cells by regulating rRNA 2'-O methylation.N6-甲基腺苷修饰的癌胚长非编码 RNA MIR4435-2HG 通过调节 rRNA 2'-O 甲基化促进肝癌细胞的干性特征。
Cell Mol Biol Lett. 2023 Oct 27;28(1):89. doi: 10.1186/s11658-023-00493-2.
3
Crosstalk of disulfidptosis-related subtypes, establishment of a prognostic signature and immune infiltration characteristics in bladder cancer based on a machine learning survival framework.
肿瘤进展中的二硫化物诱导细胞死亡
Cell Death Discov. 2025 Apr 28;11(1):205. doi: 10.1038/s41420-025-02495-9.
4
Prognostic value of disulfidptosis-associated genes in gastric cancer: a comprehensive analysis.二硫化物化死亡相关基因在胃癌中的预后价值:一项综合分析
Front Oncol. 2025 Mar 4;15:1512394. doi: 10.3389/fonc.2025.1512394. eCollection 2025.
5
Comprehensive analysis of POLH-AS1 as a prognostic biomarker in hepatocellular carcinoma.全面分析 POLH-AS1 作为肝细胞癌的预后生物标志物。
BMC Cancer. 2024 Sep 6;24(1):1112. doi: 10.1186/s12885-024-12857-8.
6
A disulfidptosis-related lncRNAs cluster to forecast the prognosis and immune landscapes of ovarian cancer.一个与二硫化物诱导细胞程序性坏死相关的长链非编码RNA簇用于预测卵巢癌的预后和免疫格局。
Front Genet. 2024 Jul 9;15:1397011. doi: 10.3389/fgene.2024.1397011. eCollection 2024.
7
Constructing a disulfidptosis-related prognostic signature of hepatocellular carcinoma based on single-cell sequencing and weighted co-expression network analysis.基于单细胞测序和加权共表达网络分析构建肝细胞癌的二硫键失调相关预后签名。
Apoptosis. 2024 Oct;29(9-10):1632-1647. doi: 10.1007/s10495-024-01968-z. Epub 2024 May 17.
基于机器学习生存框架的膀胱癌中二硫键相关亚型的串扰、预后特征模型的建立和免疫浸润特征分析。
Front Endocrinol (Lausanne). 2023 Apr 19;14:1180404. doi: 10.3389/fendo.2023.1180404. eCollection 2023.
4
A novel signature of cuproptosis-related lncRNAs predicts prognosis in glioma: Evidence from bioinformatic analysis and experiments.一种新的铜死亡相关长链非编码RNA特征可预测胶质瘤的预后:来自生物信息学分析和实验的证据。
Front Pharmacol. 2023 Apr 10;14:1158723. doi: 10.3389/fphar.2023.1158723. eCollection 2023.
5
Disulfidptosis: a new target for metabolic cancer therapy.二硫键自噬:代谢癌症治疗的新靶点。
J Exp Clin Cancer Res. 2023 Apr 27;42(1):103. doi: 10.1186/s13046-023-02675-4.
6
Deadly actin collapse by disulfidptosis.二硫键介导的细胞焦亡导致致命的肌动蛋白塌陷
Nat Cell Biol. 2023 Mar;25(3):375-376. doi: 10.1038/s41556-023-01100-4.
7
Actin cytoskeleton vulnerability to disulfide stress mediates disulfidptosis.细胞骨架对二硫键压力的脆弱性介导了二硫键细胞凋亡。
Nat Cell Biol. 2023 Mar;25(3):404-414. doi: 10.1038/s41556-023-01091-2. Epub 2023 Feb 6.
8
A Novel Cuproptosis-Related Prognostic Gene Signature and Validation of Differential Expression in Clear Cell Renal Cell Carcinoma.一个新的铜死亡相关预后基因特征,并在透明细胞肾细胞癌中验证差异表达。
Genes (Basel). 2022 May 10;13(5):851. doi: 10.3390/genes13050851.
9
Construction and Validation of a Necroptosis-Related Signature Associated With the Immune Microenvironment in Liver Hepatocellular Carcinoma.与肝细胞癌免疫微环境相关的坏死性凋亡相关特征的构建与验证
Front Genet. 2022 Apr 11;13:859544. doi: 10.3389/fgene.2022.859544. eCollection 2022.
10
Integrated Analysis of Necroptosis-Related Genes for Prognosis, Immune Microenvironment Infiltration, and Drug Sensitivity in Colon Cancer.用于结肠癌预后、免疫微环境浸润及药物敏感性的坏死性凋亡相关基因综合分析
Front Med (Lausanne). 2022 Apr 11;9:845271. doi: 10.3389/fmed.2022.845271. eCollection 2022.