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基于 SSR 标记的哈萨克斯坦东部地区 (Schlecht.) YY Yao 和 Batsch 之间的株高变异和遗传多样性。

Plant height variation and genetic diversity between (Schlecht.) YY Yao and Batsch based on using SSR markers in East Kazakhstan.

机构信息

School of Natural Sciences, Astana International University, Astana, Kazakhstan.

Molecular Genetics Laboratory, Institute of Plant Biology and Biotechnology, Almaty, Kazakhstan.

出版信息

PeerJ. 2024 Jan 11;12:e16735. doi: 10.7717/peerj.16735. eCollection 2024.

Abstract

BACKGROUND

Genetic differences between isolated endemic populations of plant species and those with widely known twin species are relevant for conserving the biological diversity of our planet's flora. (Schlecht.) YY Yao is an endangered and endemic species of shrub almond from central Asia. Few studies have explored this species, which is closely related and morphologically similar to the well-known Batsch. In this article, we present a comparative analysis of studies of three populations and one close population of in Eastern Kazakhstan in order to determine the particular geographic mutual replacement of the two species.

METHODS

The populations were collected from different ecological niches, including one steppe population near Ust-Kamenogorsk () and three populations () in the mountainous area. Estimation of plant height using a -test suggested a statistically significant difference between the populations and the two species ( < 0.0001). DNA simple sequence repeat (SSR) markers were applied to study the two species' genetic diversity and population structure.

RESULTS

A total of 19 polymorphic SSR loci were analyzed, and the results showed that the population collected in mountainous areas had a lower variation level than steppe populations. The highest level of Nei's genetic diversity index was demonstrated in the 4-UK population (0.622) of . The lowest was recorded in population 3-KA (0.461) of , collected at the highest altitude of the four populations (2,086 meters above sea level). The total genetic variation of was distributed 73% within populations and 27% between populations. STRUCTURE results showed that two morphologically similar species diverged starting at step  = 3, with limited population mixing. The results confirmed the morphological and genetic differences between and and described the level of genetic variation for . The study's results proved that the steppe zone and mountain altitude factor between and isolated mountain samples of .

摘要

背景

植物物种的孤立地方性种群与广为人知的双生种之间的遗传差异,对于保护我们星球植物区系的生物多样性具有重要意义。(Schlecht.)YY Yao 是中亚一种濒危的地方性灌木杏仁物种。很少有研究探讨过这种与广为人知的 Batsch 密切相关且形态相似的物种。在本文中,我们对哈萨克斯坦东部的三个种群和一个近缘种群进行了比较分析,以确定这两个物种在特定地理区域的相互替代情况。

方法

从不同的生态位收集了种群,包括乌斯季卡缅诺戈尔斯克附近的一个草原种群(Ust-Kamenogorsk ())和山区的三个种群()。利用 t 检验估计植物高度表明种群和两个物种之间存在统计学上的显著差异(<0.0001)。应用 DNA 简单序列重复(SSR)标记研究了两个物种的遗传多样性和种群结构。

结果

共分析了 19 个多态性 SSR 位点,结果表明,山区种群的变异水平低于草原种群。的 4-UK 种群(0.622)表现出最高的 Nei 遗传多样性指数。而在四个种群中海拔最高(海拔 2086 米)的种群 3-KA(0.461)中记录的最低。的总遗传变异有 73%分布在种群内,27%分布在种群间。STRUCTURE 结果表明,两个形态相似的物种在步骤 3 时开始分化,种群间混合有限。研究结果证实了和之间的形态和遗传差异,并描述了的遗传变异水平。研究结果表明,草原带和海拔高度因素在和孤立的山地样本之间起到了作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/52c1/10788089/6ed65bc30f2a/peerj-12-16735-g001.jpg

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