Zhao Yuan, Su Jun, Xu Chong-Yan, Li Yan-Bo, Hu Tong, Li Yi, Yang Li, Zhao Qiang, Zhang Wen-Yun
Department of Stomatology, 920th Hospital of Joint Logistics Support Force of People's Liberation Army of China, Kunming, China.
Postgraduate Research Institute, Kunming Medical University, Kunming, China.
Front Bioeng Biotechnol. 2024 Jan 12;12:1350024. doi: 10.3389/fbioe.2024.1350024. eCollection 2024.
A model of chronic infectious mandibular defect (IMD) caused by mixed infection with and was established to explore the occurrence and development of IMD and identify key genes by transcriptome sequencing and bioinformatics analysis. and were diluted to 3 × 10 CFU/mL, and 6 × 3 × 3 mm defects lateral to the Mandibular Symphysis were induced in 28 New Zealand rabbits. Sodium Morrhuate (0.5%) and 50 μL bacterial solution were injected in turn. The modeling was completed after the bone wax closed; the effects were evaluated through postoperative observations, imaging and histological analyses. Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway, and protein‒protein interaction (PPI) network analyses were performed to investigate the function of the differentially expressed genes (DEGs). All rabbits showed characteristics of infection. The bacterial cultures were positive, and polymerase chain reaction (PCR) was used to identify and . Cone beam CT and histological analyses showed inflammatory cell infiltration, pus formation in the medullary cavity, increased osteoclast activity in the defect area, and blurring at the edge of the bone defect. Bioinformatics analysis showed 1,804 DEGs, 743 were upregulated and 1,061 were downregulated. GO and KEGG analyses showed that the DEGs were enriched in immunity and osteogenesis inhibition, and the core genes identified by the PPI network were enriched in the Hedgehog pathway, which plays a role in inflammation and tissue repair; the MEF2 transcription factor family was predicted by IRegulon. By direct injection of bacterial solution into the rabbit mandible defect area, the rabbit chronic IMD model was successfully established. Based on the bioinformatics analysis, we speculate that the Hedgehog pathway and the MEF2 transcription factor family may be potential intervention targets for repairing IMD.
通过与[具体细菌名称1]和[具体细菌名称2]混合感染建立慢性感染性下颌骨缺损(IMD)模型,以探讨IMD的发生发展,并通过转录组测序和生物信息学分析确定关键基因。将[具体细菌名称1]和[具体细菌名称2]稀释至3×10⁶ CFU/mL,在28只新西兰兔的下颌骨联合外侧诱导6×3×3 mm的骨缺损。依次注射鱼肝油酸钠(0.5%)和50 μL细菌溶液。骨蜡封闭后建模完成;通过术后观察、影像学和组织学分析评估效果。进行基因本体论(GO)、京都基因与基因组百科全书(KEGG)通路和蛋白质-蛋白质相互作用(PPI)网络分析,以研究差异表达基因(DEG)的功能。所有兔子均表现出感染特征。细菌培养呈阳性,采用聚合酶链反应(PCR)鉴定[具体细菌名称1]和[具体细菌名称2]。锥形束CT和组织学分析显示有炎性细胞浸润、髓腔内有脓液形成、缺损区域破骨细胞活性增加以及骨缺损边缘模糊。生物信息学分析显示有1804个DEG,其中743个上调,1061个下调。GO和KEGG分析表明,DEG在免疫和骨生成抑制方面富集,PPI网络鉴定的核心基因在刺猬信号通路中富集,该通路在炎症和组织修复中起作用;通过IRegulon预测了MEF2转录因子家族。通过将细菌溶液直接注射到兔下颌骨缺损区域,成功建立了兔慢性IMD模型。基于生物信息学分析,我们推测刺猬信号通路和MEF2转录因子家族可能是修复IMD的潜在干预靶点。