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黄瓜(Cucumis sativus L.)中[具体基因家族]基因的全基因组鉴定及非生物胁迫表达分析

Genome-Wide Identification and Abiotic Stress Expression Analysis of and Family Genes in Cucumber ( L.).

作者信息

Xu Yang, Ran Shengxiang, Li Shuhao, Lu Junyang, Huang Weiqun, Zheng Jingyuan, Hou Maomao, Zhong Fenglin

机构信息

College of Horticulture, Fujian Agriculture and Forestry University, Fuzhou 350002, China.

Fujian Seed Station, Fuzhou 350003, China.

出版信息

Plants (Basel). 2024 Jan 31;13(3):422. doi: 10.3390/plants13030422.

Abstract

Cytokinins (CKs) are among the hormones that regulate plants' growth and development, and the and genes, which are CK degradation and biosynthesis genes, respectively, play important roles in fine-tuning plants' cytokinin levels. However, the current research on the function of and in cucumber's growth, development, and response to abiotic stress is not specific enough, and their regulatory mechanisms are still unclear. In this study, we focused on the and genes in cucumber, analyzed the physiological and biochemical properties of their encoded proteins, and explored their expression patterns in different tissue parts and under low light, salt stress, and drought stress. Eight and eight genes were identified from the cucumber genome. We constructed a phylogenetic tree from the amino acid sequences and performed prediction analyses of the cis-acting elements of the and promoters to determine whether and are responsive to light, abiotic stress, and different hormones. We also performed expression analysis of these genes in different tissues, and we found that and were highly expressed in roots and male flowers. Thus, they are involved in the whole growth and development process of the plant. This paper provides a reference for further research on the biological functions of and in regulating the growth and development of cucumber and its response to abiotic stress.

摘要

细胞分裂素(CKs)是调节植物生长发育的激素之一,其中分别作为CK降解和生物合成基因的 和 基因,在微调植物细胞分裂素水平方面发挥着重要作用。然而,目前关于 和 在黄瓜生长、发育及对非生物胁迫响应方面功能的研究还不够具体,其调控机制仍不清楚。在本研究中,我们聚焦于黄瓜中的 和 基因,分析了其编码蛋白的生理生化特性,并探究了它们在不同组织部位以及弱光、盐胁迫和干旱胁迫下的表达模式。从黄瓜基因组中鉴定出了8个 基因和8个 基因。我们根据氨基酸序列构建了系统发育树,并对 和 启动子的顺式作用元件进行了预测分析,以确定 和 是否对光、非生物胁迫及不同激素有响应。我们还对这些基因在不同组织中的表达进行了分析,发现 和 在根和雄花中高表达。因此,它们参与了植物的整个生长发育过程。本文为进一步研究 和 在调控黄瓜生长发育及其对非生物胁迫响应方面的生物学功能提供了参考。

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