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同源建模、分子动力学模拟及牛 TLR2 异二聚体化预测。

Homology Modeling, Molecular Dynamics Simulation, and Prediction of Bovine TLR2 Heterodimerization.

机构信息

Global AgroMedicine Research Center (GAMRC), Obihiro University of Agriculture and Veterinary Medicine, Obihiro 080-8555, Japan.

Department of Theriogenology, Faculty of Veterinary Medicine, Assiut University, Assiut 71515, Egypt.

出版信息

Int J Mol Sci. 2024 Jan 25;25(3):1496. doi: 10.3390/ijms25031496.

Abstract

Toll-like receptor 2 (TLR2) is a major membrane-bound receptor with ligand and species specificity that activates the host immune response. Heterodimerization of TLR2 with TLR1 (TLR2/1) or TLR6 (TLR2/6), triggered by ligand binding, is essential to initiating the signaling pathway. Bovine TLR2 (bTLR2) heterodimerization has not been defined yet compared with human and mouse TLR2s (hTLR2 and mTLR2). The aim of the present study was to model bovine TLRs (TLRs 1, 2 and 6) and create the heterodimeric forms of the bovine TLR2 using molecular dynamics (MD) simulations. We compared the intermolecular interactions in bTLR2/1-PAM3 and bTLR2/6-PAM2 with the hTLR2 and mTLR2 complexes through docking simulations and subsequent MD analyses. The present computational findings showed that bTLR2 dimerization could have a biological function and activate the immune response, similar to hTLR2 and mTLR2. Agonists and antagonists that are designed for hTLR2 and mTLR2 can target bTLR2. However, the experimental approaches to comparing the functional immune response of TLR2 across species were missing in the present study. This computational study provides a structural analysis of the bTLR2 interaction with bTLR1 and bTLR6 in the presence of an agonist/antagonist and reveals the three-dimensional structure of bTLR2 dimerization. The present findings could guide future experimental studies targeting bTLR2 with different ligands and lipopeptides.

摘要

Toll 样受体 2(TLR2)是一种具有配体和物种特异性的主要膜结合受体,可激活宿主免疫反应。配体结合触发 TLR2 与 TLR1(TLR2/1)或 TLR6(TLR2/6)的异二聚化,对于启动信号通路至关重要。与人和小鼠 TLR2(hTLR2 和 mTLR2)相比,牛 TLR2(bTLR2)的异二聚化尚未得到定义。本研究的目的是使用分子动力学(MD)模拟来模拟牛 TLR(TLR1、2 和 6)并创建牛 TLR2 的异二聚体形式。我们通过对接模拟和随后的 MD 分析比较了 bTLR2/1-PAM3 和 bTLR2/6-PAM2 中 bTLR2 与 hTLR2 和 mTLR2 复合物之间的分子间相互作用。本计算研究结果表明,bTLR2 二聚化可能具有生物功能并激活免疫反应,类似于 hTLR2 和 mTLR2。设计用于 hTLR2 和 mTLR2 的激动剂和拮抗剂可以靶向 bTLR2。然而,本研究中缺少比较 TLR2 在不同物种中的免疫反应功能的实验方法。本计算研究提供了 bTLR2 与激动剂/拮抗剂存在时与 bTLR1 和 bTLR6 相互作用的结构分析,并揭示了 bTLR2 二聚体的三维结构。本研究结果可以指导未来使用不同配体和脂肽靶向 bTLR2 的实验研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3262/10855669/280d4a226328/ijms-25-01496-g001.jpg

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