RNA Biology and Cancer Laboratory, Peter MacCallum Cancer Centre and Sir Peter MacCallum Department of Oncology, University of Melbourne, Melbourne, Victoria, Australia.
Centre for Cancer Biology, University of South Australia and SA Pathology, Adelaide, South Australia, Australia.
Nature. 2024 Mar;627(8002):212-220. doi: 10.1038/s41586-024-07060-5. Epub 2024 Feb 14.
Circular RNAs (circRNAs), which are increasingly being implicated in a variety of functions in normal and cancerous cells, are formed by back-splicing of precursor mRNAs in the nucleus. circRNAs are predominantly localized in the cytoplasm, indicating that they must be exported from the nucleus. Here we identify a pathway that is specific for the nuclear export of circular RNA. This pathway requires Ran-GTP, exportin-2 and IGF2BP1. Enhancing the nuclear Ran-GTP gradient by depletion or chemical inhibition of the major protein exporter CRM1 selectively increases the nuclear export of circRNAs, while reducing the nuclear Ran-GTP gradient selectively blocks circRNA export. Depletion or knockout of exportin-2 specifically inhibits nuclear export of circRNA. Analysis of nuclear circRNA-binding proteins reveals that interaction between IGF2BP1 and circRNA is enhanced by Ran-GTP. The formation of circRNA export complexes in the nucleus is promoted by Ran-GTP through its interactions with exportin-2, circRNA and IGF2BP1. Our findings demonstrate that adaptors such as IGF2BP1 that bind directly to circular RNAs recruit Ran-GTP and exportin-2 to export circRNAs in a mechanism that is analogous to protein export, rather than mRNA export.
环状 RNA(circRNAs)通过前体 mRNA 在核内的反向剪接形成,越来越多地被认为在正常和癌细胞的多种功能中发挥作用。circRNAs 主要定位于细胞质中,这表明它们必须从核内输出。在这里,我们确定了一条circRNA 核输出的特定途径。该途径需要 Ran-GTP、exportin-2 和 IGF2BP1。通过耗尽或化学抑制主要蛋白出口 CRM1 来增强核内 Ran-GTP 梯度,选择性地增加 circRNA 的核输出,而降低核内 Ran-GTP 梯度则选择性地阻止 circRNA 输出。耗尽或敲除 exportin-2 特异性地抑制 circRNA 的核输出。对核内 circRNA 结合蛋白的分析表明,Ran-GTP 增强了 IGF2BP1 与 circRNA 之间的相互作用。Ran-GTP 通过与 exportin-2、circRNA 和 IGF2BP1 的相互作用,促进核内 circRNA 输出复合物的形成。我们的研究结果表明,直接结合环状 RNA 的衔接蛋白(如 IGF2BP1)通过招募 Ran-GTP 和 exportin-2 来促进 circRNA 的输出,这一机制类似于蛋白质输出,而不是 mRNA 输出。