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2 型糖尿病差异羟甲基化 DNA 区域的文献鉴定:范围限定性迷你综述。

Literary Identification of Differentially Hydroxymethylated DNA Regions for Type 2 Diabetes Mellitus: A Scoping Minireview.

机构信息

Doctoral Program of Osteopathic Medicine, College of Osteopathic Medicine, Des Moines University, West Des Moines, IA 50266, USA.

Division of Biostatistics & Health Data Science, University of Minnesota School of Public Health, Minneapolis, MN 55414, USA.

出版信息

Int J Environ Res Public Health. 2024 Feb 4;21(2):177. doi: 10.3390/ijerph21020177.

DOI:10.3390/ijerph21020177
PMID:38397668
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10887687/
Abstract

Type 2 diabetes mellitus (T2DM) is a public health condition where environmental and genetic factors can intersect through hydroxymethylation. It was unclear which blood DNA regions were hydroxymethylated in human T2DM development. We aimed to identify the regions from the literature as designed in the ongoing Twins Discordant for Incident T2DM Study. A scoping review was performed using Medical Subject Headings (MeSH) and keyword methods to search PubMed for studies published in English and before 1 August 2022, following our registered protocol. The keyword and MeSH methods identified 12 and 3 records separately, and the keyword-identified records included all from the MeSH. Only three case-control studies met the criteria for the full-text review, including one MeSH-identified record. Increased global levels of 5-hydroxymethylated cytosine (5hmC) in T2DM patients versus healthy controls in blood or peripheral blood mononuclear cells were consistently reported ( < 0.05 for all). Among candidate DNA regions related to the human , , and genes, only the gene yielded higher 5hmC levels in T2DM patients with high poly-ADP-ribosylation than participants combined from those with low PARylation and healthy controls ( < 0.05). Hydroxymethylation in the -related region of blood DNA is promising to investigate for its mediation in the influences of environment on incident T2DM.

摘要

2 型糖尿病(T2DM)是一种公共健康状况,环境和遗传因素可以通过羟甲基化相互作用。在人类 T2DM 发病过程中,哪些血液 DNA 区域发生羟甲基化尚不清楚。我们旨在根据正在进行的双胞胎糖尿病病例对照研究(Twins Discordant for Incident T2DM Study)设计,从文献中确定这些区域。使用医学主题词(MeSH)和关键词方法,按照我们注册的方案,在 PubMed 上进行了范围综述,以搜索截至 2022 年 8 月 1 日之前发表的英文研究。关键词和 MeSH 方法分别识别了 12 条和 3 条记录,关键词识别的记录包括所有来自 MeSH 的记录。只有三项病例对照研究符合全文审查标准,其中包括一项 MeSH 识别的记录。与健康对照组相比,T2DM 患者血液或外周血单核细胞中的 5-羟甲基胞嘧啶(5hmC)整体水平升高(所有均<0.05)。在与人类 、 和 基因相关的候选 DNA 区域中,只有在高多聚 ADP-核糖基化的 T2DM 患者中, 基因的 5hmC 水平高于低 PAR 化患者和健康对照组的组合(<0.05)。血液 DNA 中 - 相关区域的羟甲基化有望用于研究其在环境对 T2DM 发病影响中的中介作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3d0f/10887687/bd2de9122b6b/ijerph-21-00177-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3d0f/10887687/bd2de9122b6b/ijerph-21-00177-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3d0f/10887687/bd2de9122b6b/ijerph-21-00177-g001.jpg

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本文引用的文献

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Methods Protoc. 2022 Oct 28;5(6):88. doi: 10.3390/mps5060088.
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Epigenetic regulation of inflammation in insulin resistance.胰岛素抵抗中炎症的表观遗传调控
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A Double-Edged Sword: The Two Faces of PARylation.一把双刃剑:PARylation 的两面性。
Int J Mol Sci. 2022 Aug 29;23(17):9826. doi: 10.3390/ijms23179826.
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Genome-wide Analysis Reflects Novel 5-Hydroxymethylcytosines Implicated in Diabetic Nephropathy and the Biomarker Potential.全基因组分析揭示了与糖尿病肾病相关的新型5-羟甲基胞嘧啶及其生物标志物潜力。
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