Fernández-Caballero Lidia, Martín-Merida Inmaculada, Blanco-Kelly Fiona, Avila-Fernandez Almudena, Carreño Ester, Fernandez-San Jose Patricia, Irigoyen Cristina, Jimenez-Rolando Belen, Lopez-Grondona Fermina, Mahillo Ignacio, Martin-Gutierrez María Pilar, Minguez Pablo, Perea-Romero Irene, Del Pozo-Valero Marta, Riveiro-Alvarez Rosa, Rodilla Cristina, Rodriguez-Peña Lidya, Sánchez-Barbero Ana Isabel, Swafiri Saoud T, Trujillo-Tiebas María José, Zurita Olga, García-Sandoval Blanca, Corton Marta, Ayuso Carmen
Department of Genetics & Genomics, Instituto de Investigación Sanitaria-Fundación Jiménez Díaz University Hospital, Universidad Autónoma de Madrid (IIS-FJD, UAM), 28040 Madrid, Spain.
Center for Biomedical Network Research on Rare Diseases (CIBERER), Instituto de Salud Carlos III, 28029 Madrid, Spain.
Int J Mol Sci. 2024 Mar 2;25(5):2913. doi: 10.3390/ijms25052913.
, one of the most frequently inherited retinal dystrophy (IRD)-causing genes, implies a high phenotypic variability. This study aims to analyze the mutational spectrum in one of the largest cohorts worldwide, and to describe novel pathogenic variants and genotype-phenotype correlations. A study of 220 patients from 103 families recruited from a database of 5000 families. A molecular diagnosis was performed using classical molecular approaches and next-generation sequencing. Common haplotypes were ascertained by analyzing single-nucleotide polymorphisms. We identified 56 variants, including 11 novel variants. Most of them were missense variants (64%) and were located in the D2-loop protein domain (77%). The most frequently occurring variants were p.Gly167Ser, p.Gly208Asp and p.Pro221_Cys222del. Haplotype analysis revealed a shared region in families carrying p.Leu41Pro or p.Pro221_Cys222del. Patients with retinitis pigmentosa presented an earlier disease onset. We describe the largest cohort of IRD families associated with from a single center. Most variants were located in the D2-loop domain, highlighting its importance in interacting with other proteins. Our work suggests a likely founder effect for the variants p.Leu41Pro and p.Pro221_Cys222del in our Spanish cohort. Phenotypes with a primary rod alteration presented more severe affectation. Finally, the high phenotypic variability in hinders the possibility of drawing genotype-phenotype correlations.
作为最常导致遗传性视网膜营养不良(IRD)的基因之一,其表型变异性很高。本研究旨在分析全球最大队列之一中的突变谱,并描述新的致病变异以及基因型与表型的相关性。对从5000个家庭的数据库中招募的103个家庭的220名患者进行了研究。使用经典分子方法和下一代测序进行分子诊断。通过分析单核苷酸多态性确定常见单倍型。我们鉴定出56个变异,包括11个新变异。其中大多数是错义变异(64%),且位于D2环蛋白结构域(77%)。最常见的变异是p.Gly167Ser、p.Gly208Asp和p.Pro221_Cys222del。单倍型分析显示携带p.Leu41Pro或p.Pro221_Cys222del的家庭中有一个共享区域。患有色素性视网膜炎的患者发病较早。我们描述了来自单一中心的与相关的最大IRD家庭队列。大多数变异位于D2环结构域,突出了其在与其他蛋白质相互作用中的重要性。我们的研究表明,在我们的西班牙队列中,p.Leu41Pro和p.Pro221_Cys222del变异可能存在奠基者效应。以视杆细胞原发性改变为主的表型受累更严重。最后,该基因的高表型变异性阻碍了建立基因型与表型相关性的可能性。