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The platelet-related genes associated with the prognosis of HCC by regulating cycling T cell and prolif-TAMs.

作者信息

Peng Chenjia, Wang Ying, Zhang Hengbo, Chen Ping

机构信息

School of Mathematics and Computational Science, Hunan First Normal University, Changsha, 410205, PR China.

The National & Local Joint Engineering Laboratory of Animal Peptide Drug Development, College of Life Sciences, Hunan Normal University, Changsha, 410081, PR China.

出版信息

Heliyon. 2024 Feb 27;10(5):e26798. doi: 10.1016/j.heliyon.2024.e26798. eCollection 2024 Mar 15.


DOI:10.1016/j.heliyon.2024.e26798
PMID:38486758
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10938119/
Abstract

Accumulating evidence highlighted the important roles of platelets in the prognosis and progression of various tumors. Nevertheless, the role of platelet-related genes (PRGs) in HCC remains limited. In this work, 92 differentially expressed PRGs were described in HCC using TCGA and ICGC databases. Then, based on the different expressions of PRGs, we explored two subtypes and developed the PRGs prognostic signature in HCC. The PRGs signature was an independent prognosis factor associated with immune cell infiltration in HCC. Furthermore, two external validation sets verified the expression and prognosis of the PRGs signature gene in HCC. Finally, scRNA-seq analysis demonstrated that the signature genes (CENPE and KIF2C) were mainly expressed in cycling T cells and prolif-TAMs. Enrichment analysis showed that CENPE and KIF2C regulated the cell cycle and p53 pathways in these cells. In conclusion, this study builds the PRGs-related risk signature of HCC and reveals the potential mechanism by which these signature genes regulate the immune microenvironment in HCC.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f453/10938119/ba17a3b2bc9f/gr9.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f453/10938119/c26c16c0ce2f/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f453/10938119/10a62c956112/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f453/10938119/cd9a3484586a/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f453/10938119/900ff1e60806/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f453/10938119/bdb9cfe1a685/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f453/10938119/c58b55ef0ada/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f453/10938119/90a1230a915e/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f453/10938119/2b228d412222/gr8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f453/10938119/ba17a3b2bc9f/gr9.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f453/10938119/c26c16c0ce2f/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f453/10938119/10a62c956112/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f453/10938119/cd9a3484586a/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f453/10938119/900ff1e60806/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f453/10938119/bdb9cfe1a685/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f453/10938119/c58b55ef0ada/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f453/10938119/90a1230a915e/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f453/10938119/2b228d412222/gr8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f453/10938119/ba17a3b2bc9f/gr9.jpg

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[1]
The platelet-related genes associated with the prognosis of HCC by regulating cycling T cell and prolif-TAMs.

Heliyon. 2024-2-27

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引用本文的文献

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Front Pharmacol. 2025-6-17

[2]
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[3]
A platelet-related signature for predicting the prognosis and immunotherapy benefit in bladder cancer based on machine learning combinations.

Transl Androl Urol. 2024-8-31

本文引用的文献

[1]
CD36 cancer-associated fibroblasts provide immunosuppressive microenvironment for hepatocellular carcinoma via secretion of macrophage migration inhibitory factor.

Cell Discov. 2023-3-6

[2]
Osteosarcoma subtypes based on platelet-related genes and tumor microenvironment characteristics.

Front Oncol. 2022-9-23

[3]
Development of a Platelet-Related Prognostic Model for Colorectal Cancer.

Front Genet. 2022-6-1

[4]
The Functional Roles of Immune Cells in Primary Liver Cancer.

Am J Pathol. 2022-6

[5]
Understanding initiation and progression of hepatocellular carcinoma through single cell sequencing.

Biochim Biophys Acta Rev Cancer. 2022-5

[6]
α-Hederin inhibits the platelet activating factor-induced metastasis of HCC cells through disruption of PAF/PTAFR axis cascaded STAT3/MMP-2 expression.

Pharmacol Res. 2022-4

[7]
Tumour cell-activated platelets modulate the immunological activity of CD4, CD8, and NK cells, which is efficiently antagonized by heparin.

Cancer Immunol Immunother. 2022-10

[8]
The Clinical Prediction Value of the Ubiquitination Model Reflecting the Immune Traits in LUAD.

Front Immunol. 2022

[9]
The clinical relevance of epithelial-mesenchymal transition and its correlations with tumorigenic immune infiltrates in hepatocellular carcinoma.

Immunology. 2022-6

[10]
Platelet-Released Growth Factors Influence Wound Healing-Associated Genes in Human Keratinocytes and Ex Vivo Skin Explants.

Int J Mol Sci. 2022-3-4

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