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少突胶质前体细胞的表观遗传格局随时间而变化。

The epigenetic landscape of oligodendrocyte progenitors changes with time.

作者信息

Dansu David K, Sauma Sami, Huang Dennis, Li Meng, Moyon Sarah, Casaccia Patrizia

出版信息

bioRxiv. 2024 Feb 6:2024.02.06.579145. doi: 10.1101/2024.02.06.579145.

DOI:10.1101/2024.02.06.579145
PMID:38501119
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10946295/
Abstract

Dansu et al. identify distinct histone H4 modifications as potential mechanism underlying the functional differences between adult and neonatal progenitors. While H4K8ac favors the expression of differentiation genes, their expression is halted by H4K20me3. Adult oligodendrocyte progenitors (aOPCs) generate myelinating oligodendrocytes, like neonatal progenitors (nOPCs), but they also display unique functional features. Here, using RNA-sequencing, unbiased histone proteomics analysis and ChIP-sequencing, we define the transcripts and histone marks underlying the unique properties of aOPCs. We describe the lower proliferative capacity and higher levels of expression of oligodendrocyte specific genes in aOPCs compared to nOPCs, as well as the greater levels of H4 histone marks. We also report increased occupancy of the H4K8ac mark at chromatin locations corresponding to oligodendrocyte-specific transcription factors and lipid metabolism genes. Pharmacological inhibition of H4K8ac deposition reduces the levels of these transcripts in aOPCs, rendering their transcriptome more similar to nOPCs. The repressive H4K20me3 mark is also higher in aOPCs compared to nOPCs and pharmacological inhibition of its deposition results in increased levels of genes related to the mature oligodendrocyte state. Overall, this study identifies two histone marks which are important for the unique transcriptional and functional identity of aOPCs.

摘要

丹苏等人确定了不同的组蛋白H4修饰,作为成年和新生祖细胞功能差异潜在的机制。虽然H4K8ac有利于分化基因的表达,但这些基因的表达会被H4K20me3阻断。成年少突胶质细胞祖细胞(aOPCs)与新生祖细胞(nOPCs)一样能产生髓鞘形成少突胶质细胞,但它们也表现出独特的功能特征。在这里,我们使用RNA测序、无偏组蛋白蛋白质组学分析和染色质免疫沉淀测序,确定了aOPCs独特特性背后的转录本和组蛋白标记。我们描述了与nOPCs相比,aOPCs中较低的增殖能力和较高水平的少突胶质细胞特异性基因表达,以及更高水平的H4组蛋白标记。我们还报告了在与少突胶质细胞特异性转录因子和脂质代谢基因相对应的染色质位置上,H4K8ac标记的占有率增加。对H4K8ac沉积的药理学抑制降低了aOPCs中这些转录本的水平,使其转录组更类似于nOPCs。与nOPCs相比,aOPCs中抑制性的H4K20me3标记也更高,对其沉积的药理学抑制导致与成熟少突胶质细胞状态相关的基因水平增加。总体而言,这项研究确定了两个对aOPCs独特的转录和功能特性很重要的组蛋白标记。

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