Liu Xiaoting, Chen Zhaojun, Zhang Lahong
Medical College, Hangzhou Normal University, Hangzhou, 311121, China.
Laboratory Department, Hangzhou Third People's Hospital, Hangzhou, 310009, China.
Heliyon. 2024 Mar 8;10(6):e27790. doi: 10.1016/j.heliyon.2024.e27790. eCollection 2024 Mar 30.
High-grade serous ovarian carcinoma (HGSOC) is a pathologic subtype of ovarian cancer (OC) with a more lethal prognosis. Extensive heterogeneity results in HGSOC being more susceptible to treatment resistance and adverse treatment effects. Revealing the heterogeneity involved is crucial.
We downloaded the single-cell RNA-seq (scRNA) data from GEO database and performed a scRNA analysis for cell landscape of HGSOC by using the Seurat package. The highly expressed genes were uploaded into the DAVID and KEGG database for enrichment analysis, and the AUCell package was used to calculate cancer-associated hallmark score. The SCENIC analysis was used for key regulons, the estrogen response enrichment scores in TCGA-OV RNA-seq dataset were calculated by using the GSVA package. Besides, the expression of STRA6 and IRF1 and the cell invasion and migration in si-STRA6 OC cells were detected by using the quantitative reverse transcription (qRT)-PCR method and Transwell assay respectively.
We successfully constructed a single-cell atlas of HGSOC and delineated the heterogeneity of epithelial cells therein. There were five epithelial cell subpopulations, GLDC + Epithelial cells, PEG3+ leydig cells, STRA6+ granulosa cells, POLE2+ Epithelial cells, and AURKA + Epithelial cells. STRA6+ granulosa cells have the potential to promote tumor growth as well as the highest estrogen response early activity through the biological pathways analysis of highly expressed genes and estrogen response score of ssGSEA. We found that IRF1 and STRA6 expression was remarkably upregulated in the OC cancer cell line HEY. Silencing of STRA6 markedly decreased the invasion and migration ability of the OC cancer cell line HEY.
There is extreme heterogeneity of epithelial cells in HGSOC, and STRA6+ granulosa cells may be able to promote cancer progression. Our findings are benefit to the heterogeneity identification of HGSOC and develop targeted therapy strategy for HGSOC patients.
高级别浆液性卵巢癌(HGSOC)是卵巢癌(OC)的一种病理亚型,预后更具致死性。广泛的异质性导致HGSOC更容易产生治疗耐药性和不良治疗效果。揭示其中涉及的异质性至关重要。
我们从GEO数据库下载单细胞RNA测序(scRNA)数据,并使用Seurat软件包对HGSOC的细胞图谱进行scRNA分析。将高表达基因上传至DAVID和KEGG数据库进行富集分析,并使用AUCell软件包计算癌症相关特征评分。使用SCENIC分析确定关键调控子,通过GSVA软件包计算TCGA-OV RNA测序数据集中的雌激素反应富集评分。此外,分别使用定量逆转录(qRT)-PCR法和Transwell实验检测si-STRA6 OC细胞中STRA6和IRF1的表达以及细胞侵袭和迁移能力。
我们成功构建了HGSOC的单细胞图谱,并描绘了其中上皮细胞的异质性。存在五个上皮细胞亚群,即GLDC + 上皮细胞、PEG3 + 睾丸间质细胞、STRA6 + 颗粒细胞、POLE2 + 上皮细胞和AURKA + 上皮细胞。通过对高表达基因的生物学途径分析和单样本基因集富集分析(ssGSEA)的雌激素反应评分,STRA6 + 颗粒细胞具有促进肿瘤生长的潜力以及最高的早期雌激素反应活性。我们发现OC癌细胞系HEY中IRF1和STRA6的表达显著上调。沉默STRA6可显著降低OC癌细胞系HEY的侵袭和迁移能力。
HGSOC中上皮细胞存在极端异质性,STRA6 + 颗粒细胞可能能够促进癌症进展。我们的研究结果有助于HGSOC的异质性识别,并为HGSOC患者制定靶向治疗策略。