Bernacchi Alberto, Semenzato Giulia, di Mascolo Manuel, Amata Sara, Bechini Angela, Berti Fabiola, Calonico Carmela, Catania Valentina, Emiliani Giovanni, Esposito Antonia, Greco Claudia, Mocali Stefano, Mucci Nadia, Padula Anna, Piccionello Antonio Palumbo, Nasanbat Battogtokh, Davaakhuu Gantulga, Bazarragchaa Munkhtsetseg, Riga Francesco, Augugliaro Claudio, Puglia Anna Maria, Zaccaroni Marco, Renato Fani
Department of Biology, University of Florence, Via Madonna del Piano 6, Sesto Fiorentino, 50019 Florence, Italy.
Department of Biological, Chemical and Pharmaceutical Sciences and Technologies-STEBICEF, University of Palermo, Viale delle Scienze Ed.17, 90128, Palermo, Italy.
AIMS Microbiol. 2024 Feb 28;10(1):161-186. doi: 10.3934/microbiol.2024009. eCollection 2024.
Desert soil hosts many microorganisms, whose activities are essential from an ecological viewpoint. Moreover, they are of great anthropic interest. The knowledge of extreme environments microbiomes may be beneficial for agriculture, technology, and human health. In this study, 11 strains from topsoil samples collected from the Great Gobi A Strictly Protected Area in the Gobi Desert, were characterized by a combination of different techniques. The phylogenetic analysis, performed using their 16S rDNA sequences and the most similar sequences found in databases, revealed that most of them were close to , while others joined a sister group to the clade formed by , and . The resistance of each strain to different antibiotics, heavy-metals, and NaCl was also tested as well as the inhibitory potential against human pathogens (i.e., ssp., , and ssp.) via cross-streaking, to check the production of metabolites with antimicrobial activity. Data obtained revealed that all strains were resistant to heavy metals and were able to strongly interfere with the growth of many of the human pathogens tested. The volatile organic compounds (VOCs) profile of the 11 strains was also analyzed. A total of 16 different metabolites were found, some of which were already known for having an inhibitory action against different Gram-positive and Gram-negative bacteria. Isolate MS-3A13, producing the highest quantity of VOCs, is the most efficient against complex (Bcc), , and coagulase-negative Staphylococci (CoNS) strains. This work highlights the importance of understanding microbial populations' phenotypical characteristics and dynamics in extreme environments to uncover the antimicrobial potential of new species and strains.
沙漠土壤中存在许多微生物,从生态学角度来看,它们的活动至关重要。此外,它们还具有极大的人类关注价值。对极端环境微生物群落的了解可能有益于农业、技术和人类健康。在本研究中,采用多种技术组合对从戈壁沙漠大戈壁A严格保护区采集的表层土壤样本中的11株菌株进行了表征。利用它们的16S rDNA序列以及数据库中找到的最相似序列进行系统发育分析,结果表明,其中大多数菌株与 接近,而其他菌株则加入了由 、 和 形成的进化枝的姐妹群。还测试了每株菌株对不同抗生素、重金属和氯化钠的抗性,以及通过交叉划线法对人类病原体(即 亚种、 和 亚种)的抑制潜力,以检查具有抗菌活性的代谢产物的产生情况。获得的数据表明,所有菌株都对重金属具有抗性,并且能够强烈干扰许多受试人类病原体的生长。还分析了这11株菌株的挥发性有机化合物(VOCs)谱。共发现了16种不同的代谢产物,其中一些已知对不同的革兰氏阳性和革兰氏阴性细菌具有抑制作用。产生VOCs量最高的分离株MS-3A13对 复合体(Bcc)、 和凝固酶阴性葡萄球菌(CoNS)菌株的抑制效果最佳。这项工作强调了了解极端环境中微生物种群的表型特征和动态对于揭示新物种和菌株抗菌潜力的重要性。