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通过联合DNA稳定同位素探测鉴定沙漠草原中负责凋落物分解的细菌和真菌

Identification of bacteria and fungi responsible for litter decomposition in desert steppes via combined DNA stable isotope probing.

作者信息

Ye He, Tu Nare, Wu Zhendan, He Shilong, Zhao Yu, Yue Mei, Hong Mei

机构信息

Key Laboratory of Soil Quality and Nutrient Resources, College of Grassland, Resources and Environment, Inner Mongolia Agricultural University, Hohhot, China.

Key Laboratory of Agricultural Ecological Security and Green Development, Universities of Inner Mongolia Autonomous Region, Hohhot, China.

出版信息

Front Microbiol. 2024 Mar 8;15:1353629. doi: 10.3389/fmicb.2024.1353629. eCollection 2024.

DOI:10.3389/fmicb.2024.1353629
PMID:38525080
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10957780/
Abstract

INTRODUCTION

Soil microorganisms play crucial roles in determining the fate of litter in desert steppes because their activities constitute a major component of the global carbon (C) cycle. Human activities lead to increased ecosystem nitrogen (N) deposition, which has unpredictable impacts on soil microorganism diversity and functions. Nowadays, it is necessary to further study the succession of these microorganisms in the process of litter decomposition in desert steppe, and explore the effect of N deposition on this process. This issue is particularly important to resolve because it contributes to the broader understanding of nutrient cycling processes in desert steppes.

METHODS

In this study, DNA stable isotope probing (DNA-SIP) was used to study changes in soil bacterial and fungal community composition and function during 8 weeks of culture of C-labeled litter in desert steppes.

RESULTS

The results were as follows: (1) , , and are the main microorganisms involved in litter decomposition in desert steppes; (2) N deposition (50 kg ha year) significantly increased the relative abundance of some microorganisms involved in the decomposition process; and (3) N deposition likely promotes litter decomposition in desert steppes by increasing the abundances of N cycles bacteria (usually carrying GH family functional genes).

DISCUSSION

These findings contribute to a deeper understanding of the C assimilation mechanisms associated with litter residue production, emphasizing the importance of extensive C utilization.

摘要

引言

土壤微生物在决定荒漠草原凋落物的归宿方面发挥着关键作用,因为它们的活动构成了全球碳(C)循环的一个主要组成部分。人类活动导致生态系统氮(N)沉降增加,这对土壤微生物多样性和功能产生了不可预测的影响。如今,有必要进一步研究这些微生物在荒漠草原凋落物分解过程中的演替情况,并探究氮沉降对这一过程的影响。解决这个问题尤为重要,因为它有助于更广泛地理解荒漠草原中的养分循环过程。

方法

在本研究中,利用DNA稳定同位素探针技术(DNA-SIP)研究了荒漠草原中C标记凋落物培养8周期间土壤细菌和真菌群落组成及功能的变化。

结果

结果如下:(1) 、 和 是参与荒漠草原凋落物分解的主要微生物;(2)氮沉降(50 kg·ha·年)显著增加了一些参与分解过程的微生物的相对丰度;(3)氮沉降可能通过增加氮循环细菌(通常携带GH家族功能基因)的丰度来促进荒漠草原中的凋落物分解。

讨论

这些发现有助于更深入地理解与凋落物残留产生相关的碳同化机制,强调了广泛碳利用的重要性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b5f/10957780/d1af6e79c2d5/fmicb-15-1353629-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b5f/10957780/9a6397f834cd/fmicb-15-1353629-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b5f/10957780/3fc38b2917f1/fmicb-15-1353629-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b5f/10957780/3481e41d47c6/fmicb-15-1353629-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b5f/10957780/c16aa12970cf/fmicb-15-1353629-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b5f/10957780/88be97933bec/fmicb-15-1353629-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b5f/10957780/0690bf646b65/fmicb-15-1353629-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b5f/10957780/d1af6e79c2d5/fmicb-15-1353629-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b5f/10957780/9a6397f834cd/fmicb-15-1353629-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b5f/10957780/3fc38b2917f1/fmicb-15-1353629-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b5f/10957780/3481e41d47c6/fmicb-15-1353629-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b5f/10957780/c16aa12970cf/fmicb-15-1353629-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b5f/10957780/88be97933bec/fmicb-15-1353629-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b5f/10957780/0690bf646b65/fmicb-15-1353629-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2b5f/10957780/d1af6e79c2d5/fmicb-15-1353629-g007.jpg

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