Department of Head and Neck Surgery, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital & Shenzhen Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Shenzhen, China.
Department of GCP Center, National Cancer Center/National Clinical Research Center for Cancer/Cancer Hospital & Shenzhen Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Shenzhen, China.
Front Immunol. 2024 Mar 18;15:1364082. doi: 10.3389/fimmu.2024.1364082. eCollection 2024.
It has been well established that glycosylation plays a pivotal role in initiation, progression, and therapy resistance of several cancers. However, the correlations between glycosylation and head and neck squamous cell carcinoma (HNSCC) have not been elucidated in detail.
The paramount genes governing glycosylation were discerned via the utilization of the Protein-Protein Interaction (PPI) network and correlation analysis, coupled with single-cell RNA sequencing (scRNA-seq) analysis. To construct risk models exhibiting heightened predictive efficacy, cox- and lasso-regression methodologies were employed, and the veracity of these models was substantiated across both internal and external datasets. Subsequently, an exploration into the distinctions within the tumor microenvironment (TME), immunotherapy responses, and enriched pathways among disparate risk cohorts ensued. Ultimately, cell experiments were conducted to validate the consequential impact of SMS in Head and Neck Squamous Cell Carcinoma (HNSCC).
A total of 184 genes orchestrating glycosylation were delineated for subsequent scrutiny. Employing cox- and lasso-regression methodologies, we fashioned a 3-gene signature, proficient in prognosticating the outcomes for patients afflicted with HNSCC. Noteworthy observations encompassed distinctions in the Tumor Microenvironment (TME), levels of immune cell infiltration, and the presence of immune checkpoint markers among divergent risk cohorts, holding potentially consequential implications for the clinical management of HNSCC patients.
The prognosis of HNSCC can be proficiently anticipated through risk signatures based on Glycosylation-related genes (GRGs). A thorough delineation of the GRGs signature in HNSCC holds the potential to facilitate the interpretation of HNSCC's responsiveness to immunotherapy and provide innovative strategies for cancer treatment.
糖基化在几种癌症的发生、发展和治疗耐药中起着关键作用,这一点已得到充分证实。然而,糖基化与头颈部鳞状细胞癌(HNSCC)之间的相关性尚未详细阐明。
通过利用蛋白质-蛋白质相互作用(PPI)网络和相关分析,结合单细胞 RNA 测序(scRNA-seq)分析,确定了控制糖基化的主要基因。为了构建具有更高预测效果的风险模型,使用了 cox 和lasso 回归方法,并在内部和外部数据集上验证了这些模型的准确性。随后,对不同风险队列之间的肿瘤微环境(TME)、免疫治疗反应和富集途径进行了探讨。最终,进行了细胞实验来验证 SMS 在头颈部鳞状细胞癌(HNSCC)中的重要影响。
确定了 184 个参与糖基化的基因进行进一步研究。我们使用 cox 和 lasso 回归方法构建了一个由 3 个基因组成的signature,能够很好地预测 HNSCC 患者的预后。值得注意的是,在不同风险队列中观察到了肿瘤微环境(TME)、免疫细胞浸润水平和免疫检查点标志物的差异,这可能对头颈部鳞状细胞癌患者的临床管理产生重要影响。
基于糖基化相关基因(GRGs)的风险 signature 可以很好地预测 HNSCC 的预后。对头颈部鳞状细胞癌中 GRGs signature 的深入描述可能有助于解释 HNSCC 对免疫治疗的反应,并为癌症治疗提供新的策略。