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吉尔吉斯共和国特有物种Vved.（日光兰科）的完整叶绿体基因组。

The complete chloroplast genome of Vved. (Asphodelaceae), an endemic species of Kyrgyz Republic.

作者信息

Jang Ju Eun, Jeong Hyeon Jin, Kim Aleksey L, Choi Ye-Rim, Lazkov Georgii A, Jang Chang-Gee, Choi Hyeok Jae, Gil Hee-Young

机构信息

Division of Forest Biodiversity, Korea National Arboretum, Pocheon, South Korea.

Institute for Biology, National Academy of Sciences, Bishkek, Kyrgyzstan.

出版信息

Mitochondrial DNA B Resour. 2024 Apr 3;9(4):437-441. doi: 10.1080/23802359.2024.2336003. eCollection 2024.

DOI:10.1080/23802359.2024.2336003
PMID:38586509
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10993749/
Abstract

Vved. 1971 is a perennial herbaceous plant in the family Asphodelaceae and an endemic species of the Kyrgyz Republic; however, its complete chloroplast genome sequence has not been reported. Here, we investigated the complete chloroplast (cp) genome of using next-generation sequencing. The cp genome was 153,744 bp long, with a large single copy (84,020 bp), a small single copy (16,766 bp), and a pair of inverted repeats (26,479 bp). The genome encodes 132 genes, including 86 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic analysis revealed that the genus forms a monophyletic group and is closely related to . This study provides a molecular foundation for future phylogenetic studies of .

摘要

Vved. 1971是天门冬科的一种多年生草本植物，是吉尔吉斯共和国的特有物种；然而，其完整的叶绿体基因组序列尚未见报道。在此，我们利用二代测序技术对其完整的叶绿体（cp）基因组进行了研究。该cp基因组长度为153,744 bp，包含一个大单拷贝区（84,020 bp）、一个小单拷贝区（16,766 bp）和一对反向重复序列（26,479 bp）。该基因组编码132个基因，包括86个蛋白质编码基因、38个tRNA基因和8个rRNA基因。系统发育分析表明，该属形成一个单系类群，且与 关系密切。本研究为该属未来的系统发育研究提供了分子基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e81/10993749/7372e04a09d3/TMDN_A_2336003_F0003_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e81/10993749/1e5332374fca/TMDN_A_2336003_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e81/10993749/5f5721c6a0fd/TMDN_A_2336003_F0002_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e81/10993749/7372e04a09d3/TMDN_A_2336003_F0003_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e81/10993749/1e5332374fca/TMDN_A_2336003_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e81/10993749/5f5721c6a0fd/TMDN_A_2336003_F0002_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3e81/10993749/7372e04a09d3/TMDN_A_2336003_F0003_B.jpg

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