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使用来自20507的细胞外提取物的基因组和生物学控制

Genomic and biological control of using an extracellular extract from 20507.

作者信息

Cheng Yunqing, Lou Hanxiao, He Hongli, He Xinyi, Wang Zicheng, Gao Xin, Liu Jianfeng

机构信息

Jilin Provincial Key Laboratory of Plant Resource Science and Green Production, Jilin Normal University, Siping, Jilin, China.

Department of Microbiology, Oregon State University, Corvallis, OR, United States.

出版信息

Front Microbiol. 2024 Mar 26;15:1385067. doi: 10.3389/fmicb.2024.1385067. eCollection 2024.

DOI:10.3389/fmicb.2024.1385067
PMID:38596383
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11002150/
Abstract

INTRODUCTION

is a known pathogen that harms crops and vegetables. Unfortunately, there is a lack of effective biological control measures for this pathogen. 20507 has a strong antagonistic effect on ; however, the biological basis of its antifungal effect is not fully understood.

METHODS

In this study, the broad-spectrum antagonistic microorganisms of 20507 were investigated, and the active antifungal ingredients in this strain were isolated, purified, identified and thermal stability experiments were carried out to explore its antifungal mechanism.

RESULTS

The 20507 genome comprised one circular chromosome with a length of 4,043,341 bp, including 3,879 genes, 185 tandem repeats, 87 tRNAs, and 27 rRNAs. Comparative genomic analysis revealed that our sequenced strain had the closest genetic relationship with (GenBank ID: NC 009725.2); however, there were significant differences in the positions of genes within the two genomes. It is predicted that 20507 encode 12 secondary metabolites, including difficidin, macrolactin H, fengycin, surfactin, bacillibactin, bacillothiazole A-N, butirosin a/b, and bacillaene. Results showed that 20507 produced various antagonistic effects on six plant pathogen strains: , and . Acid precipitation followed by 80% methanol leaching is an effective method for isolating the antifungal component ME80 in 20507, which can damage the membranes of hyphae and has good heat resistance. Using high-performance liquid chromatography, and Mass Spectrometry analysis, it is believed that fengycin C72H110N12O20 is the main active antifungal substance.

DISCUSSION

This study provides new resources for the biological control of in soybeans and a theoretical basis for further clarification of the mechanism of action of 20507.

摘要

引言

[病原体名称]是一种已知的危害农作物和蔬菜的病原体。不幸的是,针对这种病原体缺乏有效的生物防治措施。20507对[病原体名称]具有很强的拮抗作用;然而,其抗真菌作用的生物学基础尚未完全明确。

方法

在本研究中,对20507的广谱拮抗微生物进行了研究,分离、纯化、鉴定了该菌株中的活性抗真菌成分,并进行了热稳定性实验以探究其抗真菌机制。

结果

20507基因组由一条长度为4,043,341 bp的环状染色体组成,包括3,879个基因、185个串联重复序列、87个tRNA和27个rRNA。比较基因组分析表明,我们测序的菌株与[参考菌株名称](GenBank ID: NC 009725.2)的遗传关系最密切;然而,两个基因组内基因的位置存在显著差异。预测20507编码12种次级代谢产物,包括艰难梭菌素、大环内酯H、丰原素、表面活性素、杆菌铁载体、杆菌噻唑A - N、丁酰苷菌素a/b和杆菌烯。结果表明,20507对六种植物病原体菌株[病原体名称]产生了多种拮抗作用。酸沉淀后用80%甲醇浸提是分离20507中抗真菌成分ME80的有效方法,ME80可破坏[病原体名称]菌丝的膜结构且具有良好的耐热性。通过高效液相色谱和质谱分析,认为丰原素C72H110N12O20是主要的活性抗真菌物质。

讨论

本研究为大豆中[病原体名称]的生物防治提供了新资源,并为进一步阐明20507的作用机制提供了理论依据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/db5c/11002150/482709c70ff8/fmicb-15-1385067-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/db5c/11002150/47c9ecfbba1e/fmicb-15-1385067-g001.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/db5c/11002150/aa43536097c3/fmicb-15-1385067-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/db5c/11002150/87cef1c3feac/fmicb-15-1385067-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/db5c/11002150/c5fc9eb03b48/fmicb-15-1385067-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/db5c/11002150/2dbb1d495d67/fmicb-15-1385067-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/db5c/11002150/482709c70ff8/fmicb-15-1385067-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/db5c/11002150/47c9ecfbba1e/fmicb-15-1385067-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/db5c/11002150/518bd725b2fe/fmicb-15-1385067-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/db5c/11002150/404e36580a68/fmicb-15-1385067-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/db5c/11002150/8bef891a6d9a/fmicb-15-1385067-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/db5c/11002150/aa43536097c3/fmicb-15-1385067-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/db5c/11002150/87cef1c3feac/fmicb-15-1385067-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/db5c/11002150/c5fc9eb03b48/fmicb-15-1385067-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/db5c/11002150/2dbb1d495d67/fmicb-15-1385067-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/db5c/11002150/482709c70ff8/fmicb-15-1385067-g009.jpg

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