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用于肿瘤细胞核和皮肤病变的轻量级语义分割网络。

Lightweight semantic segmentation network for tumor cell nuclei and skin lesion.

作者信息

Chen Yan, Sun Xiaoming, Duan Yan, Wang Yongliang, Zhang Junkai, Zhu Yuemin

机构信息

Heilongjiang Province Key Laboratory of Laser Spectroscopy Technology and Application, Harbin University of Science and Technology, Harbin, China.

INSA Lyon, University Claude Bernard Lyon 1, CNRS, Inserm, CREATIS UMR 5220, U1294, Lyon, France.

出版信息

Front Oncol. 2024 Mar 27;14:1254705. doi: 10.3389/fonc.2024.1254705. eCollection 2024.

DOI:10.3389/fonc.2024.1254705
PMID:38601757
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11005060/
Abstract

In the field of medical image segmentation, achieving fast and accurate semantic segmentation of tumor cell nuclei and skin lesions is of significant importance. However, the considerable variations in skin lesion forms and cell types pose challenges to attaining high network accuracy and robustness. Additionally, as network depth increases, the growing parameter size and computational complexity make practical implementation difficult. To address these issues, this paper proposes MD-UNet, a fast cell nucleus segmentation network that integrates Tokenized Multi-Layer Perceptron modules, attention mechanisms, and Inception structures. Firstly, tokenized MLP modules are employed to label and project convolutional features, reducing computational complexity. Secondly, the paper introduces Depthwise Attention blocks and Multi-layer Feature Extraction modules. The Depthwise Attention blocks eliminate irrelevant and noisy responses from coarse-scale extracted information, serving as alternatives to skip connections in the UNet architecture. The Multi-layer Feature Extraction modules capture a wider range of high-level and low-level semantic features during decoding and facilitate feature fusion. The proposed MD-UNet approach is evaluated on two datasets: the International Skin Imaging Collaboration (ISIC2018) dataset and the PanNuke dataset. The experimental results demonstrate that MD-UNet achieves the best performance on both datasets.

摘要

在医学图像分割领域,实现肿瘤细胞核和皮肤病变的快速、准确语义分割具有重要意义。然而,皮肤病变形式和细胞类型的显著差异给实现高网络准确性和鲁棒性带来了挑战。此外,随着网络深度的增加,参数规模和计算复杂度不断增长,使得实际应用变得困难。为了解决这些问题,本文提出了MD-UNet,一种集成了量化多层感知器模块、注意力机制和Inception结构的快速细胞核分割网络。首先,使用量化MLP模块对卷积特征进行标记和投影,降低计算复杂度。其次,本文引入了深度注意力块和多层特征提取模块。深度注意力块消除了粗粒度提取信息中的无关和噪声响应,可替代UNet架构中的跳跃连接。多层特征提取模块在解码过程中捕捉更广泛的高级和低级语义特征,并促进特征融合。所提出的MD-UNet方法在两个数据集上进行了评估:国际皮肤成像协作组织(ISIC2018)数据集和PanNuke数据集。实验结果表明,MD-UNet在两个数据集上均取得了最佳性能。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1f7/11005060/bfd236c0679c/fonc-14-1254705-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1f7/11005060/d9e047197bb1/fonc-14-1254705-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1f7/11005060/e5ff81a5ba7b/fonc-14-1254705-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1f7/11005060/26c3ffebe9b0/fonc-14-1254705-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1f7/11005060/1a3abc267570/fonc-14-1254705-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1f7/11005060/2ea565c4d7bc/fonc-14-1254705-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1f7/11005060/e843e4a62ba7/fonc-14-1254705-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1f7/11005060/e1bb763aab3c/fonc-14-1254705-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1f7/11005060/aa904d19f129/fonc-14-1254705-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1f7/11005060/bfd236c0679c/fonc-14-1254705-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1f7/11005060/d9e047197bb1/fonc-14-1254705-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1f7/11005060/e5ff81a5ba7b/fonc-14-1254705-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1f7/11005060/26c3ffebe9b0/fonc-14-1254705-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1f7/11005060/1a3abc267570/fonc-14-1254705-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1f7/11005060/2ea565c4d7bc/fonc-14-1254705-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1f7/11005060/e843e4a62ba7/fonc-14-1254705-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1f7/11005060/e1bb763aab3c/fonc-14-1254705-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1f7/11005060/aa904d19f129/fonc-14-1254705-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1f7/11005060/bfd236c0679c/fonc-14-1254705-g009.jpg

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