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Esm-1介导与糖尿病肾病相关的转录极化。

Esm-1 mediates transcriptional polarization associated with diabetic kidney disease.

作者信息

Gaudet Alexandre, Zheng Xiaoyi, Kambham Neeraja, Bhalla Vivek

机构信息

Division of Nephrology, Department of Medicine, Stanford University School of Medicine, Stanford, California, United States.

Univ. Lille, CNRS, Inserm, CHU Lille, Institut Pasteur de Lille, U1019-UMR9017-CIIL-Centre d'Infection et d'Immunité de Lille, Lille, France.

出版信息

Am J Physiol Renal Physiol. 2024 Jun 1;326(6):F1016-F1031. doi: 10.1152/ajprenal.00419.2023. Epub 2024 Apr 11.

Abstract

Esm-1, endothelial cell-specific molecule-1, is a susceptibility gene for diabetic kidney disease (DKD) and is a secreted proteoglycan, with notable expression in kidney, which attenuates inflammation and albuminuria. However, little is known about expression in mature tissues in the presence or absence of diabetes. We utilized publicly available single-cell RNA sequencing data to characterize expression in 27,786 renal endothelial cells (RECs) obtained from three mouse and four human databases. We validated our findings using bulk transcriptome data from 20 healthy subjects and 41 patients with DKD and using RNAscope. In both mice and humans, is expressed in a subset of all REC types and represents a minority of glomerular RECs. In patients, (+) cells exhibit conserved enrichment for blood vessel development genes. With diabetes, these cells are fewer in number and shift expression toward chemotaxis pathways. correlates with a majority of genes within these pathways, delineating a glomerular transcriptional polarization reflected by the magnitude of deficiency. Diabetes correlates with lower expression and with changes in the functional characterization of (+) cells. Thus, appears to be a marker for glomerular transcriptional polarization in DKD. Esm-1 is primarily expressed in glomerular endothelium in humans. Cells expressing exhibit a high degree of conservation in the enrichment of genes related to blood vessel development. In the context of diabetes, these cells are reduced in number and show a significant transcriptional shift toward the chemotaxis pathway. In diabetes, there is a transcriptional polarization in the glomerulus that is reflected by the degree of deficiency.

摘要

内皮细胞特异性分子-1(Esm-1)是糖尿病肾病(DKD)的一个易感基因,是一种分泌型蛋白聚糖,在肾脏中表达显著,可减轻炎症和蛋白尿。然而,对于其在糖尿病存在或不存在情况下在成熟组织中的表达知之甚少。我们利用公开可用的单细胞RNA测序数据来表征从三个小鼠和四个人类数据库获得的27786个肾内皮细胞(REC)中的表达情况。我们使用来自20名健康受试者和41名DKD患者的批量转录组数据以及RNAscope验证了我们的发现。在小鼠和人类中,Esm-1在所有REC类型的一个子集中表达,并且在肾小球REC中占少数。在患者中,Esm-1(+)细胞在血管发育基因方面表现出保守的富集。在糖尿病状态下,这些细胞数量减少,并且表达向趋化途径转变。Esm-1与这些途径中的大多数基因相关,描绘了由Esm-1缺乏程度反映的肾小球转录极化。糖尿病与较低的Esm-1表达以及Esm-1(+)细胞功能特征的变化相关。因此,Esm-1似乎是DKD中肾小球转录极化的一个标志物。Esm-1主要在人类肾小球内皮中表达。表达Esm-1的细胞在与血管发育相关基因的富集方面表现出高度保守性。在糖尿病背景下,这些细胞数量减少,并显示出向趋化途径的显著转录转变。在糖尿病中,肾小球存在转录极化,这由Esm-1缺乏程度反映出来。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5d45/11386982/701e9cf177a3/ajprenal.00419.2023_f0-4.jpg

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