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2011 年至 2022 年德国产 OXA-48 样 株的出现。

Emergence of OXA-48-like producing species, Germany, 2011 to 2022.

机构信息

Goethe University Frankfurt, University Hospital, Institute of Medical Microbiology and Infection Control, Frankfurt am Main, Germany.

University Hospital Cologne and Faculty of Medicine, University of Cologne, Institute for Medical Microbiology, Immunology and Hygiene, Cologne, Germany.

出版信息

Euro Surveill. 2024 Apr;29(15). doi: 10.2807/1560-7917.ES.2024.29.15.2300528.


DOI:10.2807/1560-7917.ES.2024.29.15.2300528
PMID:38606571
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11010590/
Abstract

BackgroundCarbapenemase-producing Enterobacterales are a public health threat worldwide and OXA-48 is the most prevalent carbapenemase in Germany and western Europe. However, the molecular epidemiology of OXA-48 in species other than and remains poorly understood.AimTo analyse the molecular epidemiology of OXA-48 and OXA-48-like carbapenemases in species (spp.) in Germany between 2011 and 2022.MethodsData of 26,822 Enterobacterales isolates sent to the National Reference Centre (NRC) for Gram-negative bacteria were evaluated. Ninety-one isolates from 40 German hospitals harbouring were analysed by whole genome sequencing and conjugation experiments.ResultsThe frequency of OXA-48 in (CF) has increased steadily since 2011 and is now the most prevalent carbapenemase in this species in Germany. Among 91 in-depth analysed spp. isolates, CF (n = 73) and (n = 8) were the most common species and OXA-48 was the most common variant (n = 77), followed by OXA-162 (n = 11) and OXA‑181 (n = 3). Forty percent of the isolates belonged to only two sequence types (ST19 and ST22), while most other STs were singletons. The plasmids harbouring and belonged to the plasmid types IncL (n = 85) or IncF (n = 3), and plasmids harbouring to IncX3 (n = 3). Three IncL plasmid clusters (57/85 IncL plasmids) were identified, which were highly transferable in contrast to sporadic plasmids.ConclusionIn CF in Germany, OXA-48 is the predominant carbapenemase. Dissemination is likely due to distinct highly transmissible plasmids harbouring or and the spread of the high-risk clonal lineages ST19 and ST22.

摘要

背景 产碳青霉烯酶肠杆菌科在全球范围内对公共健康构成威胁,而 OXA-48 是德国和西欧最普遍的碳青霉烯酶。然而,除 和 以外的 种属中 OXA-48 的分子流行病学仍知之甚少。 目的 分析 2011 年至 2022 年期间德国 种属(spp.)中 OXA-48 和 OXA-48 样碳青霉烯酶的分子流行病学。 方法 对送往国家参考中心(NRC)进行革兰氏阴性细菌检测的 26822 株肠杆菌科分离株的数据进行评估。对来自德国 40 家医院的 91 株携带 的 进行全基因组测序和接合实验分析。 结果 自 2011 年以来, (CF)中 OXA-48 的频率稳步上升,目前已成为德国该种属中最常见的碳青霉烯酶。在深入分析的 91 株 spp. 分离株中,CF(n=73)和 (n=8)是最常见的种属,OXA-48 是最常见的变体(n=77),其次是 OXA-162(n=11)和 OXA-181(n=3)。40%的分离株仅属于两个序列类型(ST19 和 ST22),而其他大多数 ST 则是单例。携带 和 的质粒属于 IncL(n=85)或 IncF(n=3)型,携带 的质粒属于 IncX3(n=3)型。鉴定出三个 IncL 质粒簇(85 个 IncL 质粒中的 57 个),与散在质粒相比,这些质粒具有高度可转移性。 结论 在德国 CF 中,OXA-48 是主要的碳青霉烯酶。传播可能是由于携带 或 的高度可传播质粒以及高风险克隆谱系 ST19 和 ST22 的传播所致。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f7c9/11010590/0c6fc82ecf94/2300528-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f7c9/11010590/bc6ef548becf/2300528-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f7c9/11010590/cf8c4774f3ff/2300528-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f7c9/11010590/0d651993d130/2300528-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f7c9/11010590/576d8ffe4c91/2300528-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f7c9/11010590/056d3a837760/2300528-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f7c9/11010590/0c6fc82ecf94/2300528-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f7c9/11010590/bc6ef548becf/2300528-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f7c9/11010590/cf8c4774f3ff/2300528-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f7c9/11010590/0d651993d130/2300528-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f7c9/11010590/576d8ffe4c91/2300528-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f7c9/11010590/056d3a837760/2300528-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f7c9/11010590/0c6fc82ecf94/2300528-f6.jpg

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本文引用的文献

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Microbiology (Reading). 2023-7

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