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新型吲唑衍生物的合成、分子对接及密度泛函理论研究

Synthesis molecular docking and DFT studies on novel indazole derivatives.

作者信息

Gopi Bandaru, Vijayakumar Vijayaparthasarathi

机构信息

Department of Chemistry, School of Advanced Sciences, Vellore Institute of Technology Vellore - 632014 India

出版信息

RSC Adv. 2024 Apr 23;14(19):13218-13226. doi: 10.1039/d4ra02151g. eCollection 2024 Apr 22.

Abstract

The amide bond is an important functional group used in various fields of chemistry, including organic synthesis, drug discovery, polymers, and biology. Although normal amides are planar, and the amide has an N-C(O) bond, herein, the 26 indazole derivatives were reported amide cross-coupling (8a-8z). Using IR, H NMR, C NMR, and mass spectrometry, all of the produced compounds were analysed. A DFT computational study was also conducted using GAUSSIAN 09-Gaussian View 6.1, which revealed that 8a, 8c, and 8s had the most substantial HOMO-LUMO energy gap. The effectiveness of indazole moieties with renal cancer-related protein (PDB: 6FEW) was assessed by docking the derivatives using Autodock 4. The analysis showed that derivatives 8v, 8w, and 8y had the highest binding energies.

摘要

酰胺键是一种重要的官能团,用于化学的各个领域,包括有机合成、药物发现、聚合物和生物学。虽然普通酰胺是平面的,且酰胺含有N-C(O)键,但在此报道了26种吲唑衍生物的酰胺交叉偶联反应(8a-8z)。使用红外光谱、氢核磁共振谱、碳核磁共振谱和质谱对所有生成的化合物进行了分析。还使用GAUSSIAN 09-Gaussian View 6.1进行了密度泛函理论计算研究,结果表明8a、8c和8s具有最大的最高占据分子轨道-最低未占分子轨道能隙。通过使用Autodock 4对接衍生物来评估吲唑部分与肾癌相关蛋白(PDB: 6FEW)的有效性。分析表明,衍生物8v、8w和8y具有最高的结合能。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9e23/11037238/c022654c3d87/d4ra02151g-f1.jpg

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