Lu Yingling, Tang Dexiang, Liu Zuoheng, Zhao Jing, Chen Yue, Ma Jinmei, Luo Lijun, Yu Hong
Yunnan Herbal Laboratory, College of Ecology and Environmental Sciences, Yunnan University, Kunming, China.
The International Joint Research Center for Sustainable Utilization of Cordyceps Bioresources in China and Southeast Asia, Yunnan University, Kunming, China.
Front Microbiol. 2024 Apr 15;15:1293077. doi: 10.3389/fmicb.2024.1293077. eCollection 2024.
lato is a common pathogenic fungus of ants. A new species, , was described based on morphology and phylogenetic evidence from five genes (SSU, LSU, , , and ). The whole genomes of , , , , , , and were sequenced and annotated and compared with whole genome sequences of other species in lato. The basic genome-wide characteristics of the 12 species showed that the related species had similar GC content and genome size. AntiSMASH and local BLAST analyses revealed that the number and types of putative SM BGCs, NPPS, PKS, and hybrid PKS-NRPS domains for the 12 species differed significantly among different species in the same genus. The putative BGC of five compounds, namely, NG-391, lucilactaene, higginsianin B, pyripyropene A, and pyranonigrin E were excavated. NG-391 and lucilactaene were 7-desmethyl analogs of fusarin C. Furthermore, the 12 genomes had common domains, such as KS-AT-DH-MT-ER-KR-ACP and SAT-KS-AT-PT-ACP-ACP-Te. The ML and BI trees of SAT-KS-AT-PT-ACP-ACP-Te were highly consistent with the multigene phylogenetic tree in the 12 species. This study provided a method to obtain the living culture of lato species and its asexual formed on the basis of living culture, which was of great value for further study of lato species in the future, and also laid a foundation for further analysis of secondary metabolites of lato.
拉托是蚂蚁常见的致病真菌。基于五个基因(小亚基核糖体RNA、大亚基核糖体RNA、[此处原文缺失基因名称]、[此处原文缺失基因名称]和[此处原文缺失基因名称])的形态学和系统发育证据,描述了一个新物种。对[此处原文缺失物种名称]、[此处原文缺失物种名称]、[此处原文缺失物种名称]、[此处原文缺失物种名称]、[此处原文缺失物种名称]、[此处原文缺失物种名称]和[此处原文缺失物种名称]的全基因组进行了测序、注释,并与拉托属其他物种的全基因组序列进行了比较。这12个物种的全基因组基本特征表明,相关物种具有相似的GC含量和基因组大小。抗SMASH和局部BLAST分析表明,这12个物种中假定的次生代谢物生物合成基因簇、非核糖体肽合成酶、聚酮合酶和杂合聚酮合酶-非核糖体肽合成酶结构域的数量和类型在同一属的不同物种间存在显著差异。挖掘出了五种化合物的假定生物合成基因簇,即NG-391、鲁西拉菌素、希金斯菌素B、吡咯并吡咯菌素A和吡喃黑菌素E。NG-391和鲁西拉菌素是镰刀菌素C的7-去甲基类似物。此外,这12个基因组具有共同的结构域,如KS-AT-DH-MT-ER-KR-ACP和SAT-KS-AT-PT-ACP-ACP-Te。SAT-KS-AT-PT-ACP-ACP-Te的最大似然树和贝叶斯树与这12个物种的多基因系统发育树高度一致。本研究提供了一种获取拉托物种活体培养物及其无性型的方法,这对未来进一步研究拉托物种具有重要价值,也为进一步分析拉托物种的次生代谢产物奠定了基础。