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基于可配置逻辑模块的可擦除和现场可编程 DNA 电路。

Erasable and Field Programmable DNA Circuits Based on Configurable Logic Blocks.

机构信息

School of Life Science and Technology, Wuhan Polytechnic University, Wuhan, 430023, China.

Institute of Reproductive Health, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, 430030, China.

出版信息

Adv Sci (Weinh). 2024 Jul;11(26):e2400011. doi: 10.1002/advs.202400011. Epub 2024 May 2.

DOI:10.1002/advs.202400011
PMID:38698560
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11234411/
Abstract

DNA is commonly employed as a substrate for the building of artificial logic networks due to its excellent biocompatibility and programmability. Till now, DNA logic circuits are rapidly evolving to accomplish advanced operations. Nonetheless, nowadays, most DNA circuits remain to be disposable and lack of field programmability and thereby limits their practicability. Herein, inspired by the Configurable Logic Block (CLB), the CLB-based erasable field-programmable DNA circuit that uses clip strands as its operation-controlling signals is presented. It enables users to realize diverse functions with limited hardware. CLB-based basic logic gates (OR and AND) are first constructed and demonstrated their erasability and field programmability. Furthermore, by adding the appropriate operation-controlling strands, multiple rounds of programming are achieved among five different logic operations on a two-layer circuit. Subsequently, a circuit is successfully built to implement two fundamental binary calculators: half-adder and half-subtractor, proving that the design can imitate silicon-based binary circuits. Finally, a comprehensive CLB-based circuit is built that enables multiple rounds of switch among seven different logic operations including half-adding and half-subtracting. Overall, the CLB-based erasable field-programmable circuit immensely enhances their practicability. It is believed that design can be widely used in DNA logic networks due to its efficiency and convenience.

摘要

DNA 由于其出色的生物相容性和可编程性,通常被用作构建人工逻辑网络的底物。到目前为止,DNA 逻辑电路正在迅速发展,以实现更高级的操作。然而,目前大多数 DNA 电路仍然是一次性的,缺乏现场可编程性,从而限制了它们的实用性。在此,受可配置逻辑块(CLB)的启发,提出了一种基于 CLB 的可擦除现场可编程 DNA 电路,该电路使用剪辑链作为其操作控制信号。它使用有限的硬件就能实现各种功能。首先构建了基于 CLB 的基本逻辑门(或门和与门),并证明了它们的可擦除性和现场可编程性。此外,通过添加适当的操作控制链,在两层电路上实现了五种不同逻辑操作之间的多轮编程。随后,成功构建了一个电路来实现两个基本的二进制计算器:半加器和半减器,证明了该设计可以模拟基于硅的二进制电路。最后,构建了一个全面的基于 CLB 的电路,能够在包括半加和半减在内的七种不同逻辑操作之间进行多轮开关。总的来说,基于 CLB 的可擦除现场可编程电路极大地提高了它们的实用性。由于其高效和方便,相信该设计可以广泛应用于 DNA 逻辑网络。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b1b/11234411/ea466a2233ca/ADVS-11-2400011-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b1b/11234411/558b5516967e/ADVS-11-2400011-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b1b/11234411/21fa84cc484e/ADVS-11-2400011-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b1b/11234411/66ba2d8bf109/ADVS-11-2400011-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b1b/11234411/ad33c9bb2a4b/ADVS-11-2400011-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b1b/11234411/ea466a2233ca/ADVS-11-2400011-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b1b/11234411/558b5516967e/ADVS-11-2400011-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b1b/11234411/21fa84cc484e/ADVS-11-2400011-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b1b/11234411/66ba2d8bf109/ADVS-11-2400011-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b1b/11234411/ad33c9bb2a4b/ADVS-11-2400011-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b1b/11234411/ea466a2233ca/ADVS-11-2400011-g004.jpg

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1
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2
Tracking early lung cancer metastatic dissemination in TRACERx using ctDNA.使用 ctDNA 追踪 TRACERx 中的早期肺癌转移扩散。
Nature. 2023 Apr;616(7957):553-562. doi: 10.1038/s41586-023-05776-4. Epub 2023 Apr 13.
3
Toehold-Mediated Strand Displacement in Random Sequence Pools.在随机序列池中进行的锤头介导链置换反应。
J Am Chem Soc. 2023 Jan 11;145(1):634-644. doi: 10.1021/jacs.2c11208. Epub 2022 Dec 26.
4
Programmable DNA biocomputing circuits for rapid and intelligent screening of SARS-CoV-2 variants.可编程 DNA 生物计算电路可快速智能筛选 SARS-CoV-2 变体。
Biosens Bioelectron. 2023 Mar 1;223:115025. doi: 10.1016/j.bios.2022.115025. Epub 2022 Dec 18.
5
A versatile and convenient tool for regulation of DNA strand displacement and post-modification on pre-fabricated DNA nanodevices.一种用于调节预制 DNA 纳米器件上 DNA 链置换和后修饰的通用便捷工具。
Nucleic Acids Res. 2023 Jan 11;51(1):29-40. doi: 10.1093/nar/gkac1193.
6
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Sci Adv. 2022 Sep 9;8(36):eabn4030. doi: 10.1126/sciadv.abn4030.
7
Near-fatal Legionella pneumonia in a neonate linked to home humidifier by metagenomic next generation sequencing.通过宏基因组下一代测序确定与家用加湿器相关的新生儿近致命性军团菌肺炎
Med. 2022 Aug 12;3(8):565-567. doi: 10.1016/j.medj.2022.06.004. Epub 2022 Jul 20.
8
B cell-derived cfDNA after primary BNT162b2 mRNA vaccination anticipates memory B cells and SARS-CoV-2 neutralizing antibodies.在初次接种 BNT162b2 mRNA 疫苗后,B 细胞衍生的 cfDNA 可预测记忆 B 细胞和 SARS-CoV-2 中和抗体。
Med. 2022 Jul 8;3(7):468-480.e5. doi: 10.1016/j.medj.2022.05.005. Epub 2022 May 19.
9
Design and Realization of Triple dsDNA Nanocomputing Circuits in Microfluidic Chips.微流控芯片中三重 dsDNA 纳米计算电路的设计与实现。
ACS Appl Mater Interfaces. 2022 Mar 2;14(8):10721-10728. doi: 10.1021/acsami.1c24220. Epub 2022 Feb 21.
10
Protein-Protein Communication Mediated by an Antibody-Responsive DNA Nanodevice.抗体响应 DNA 纳米器件介导的蛋白质-蛋白质通讯。
Angew Chem Int Ed Engl. 2022 Mar 14;61(12):e202115680. doi: 10.1002/anie.202115680. Epub 2022 Feb 9.