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基于可配置逻辑模块的可擦除和现场可编程 DNA 电路。

Erasable and Field Programmable DNA Circuits Based on Configurable Logic Blocks.

机构信息

School of Life Science and Technology, Wuhan Polytechnic University, Wuhan, 430023, China.

Institute of Reproductive Health, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, 430030, China.

出版信息

Adv Sci (Weinh). 2024 Jul;11(26):e2400011. doi: 10.1002/advs.202400011. Epub 2024 May 2.

Abstract

DNA is commonly employed as a substrate for the building of artificial logic networks due to its excellent biocompatibility and programmability. Till now, DNA logic circuits are rapidly evolving to accomplish advanced operations. Nonetheless, nowadays, most DNA circuits remain to be disposable and lack of field programmability and thereby limits their practicability. Herein, inspired by the Configurable Logic Block (CLB), the CLB-based erasable field-programmable DNA circuit that uses clip strands as its operation-controlling signals is presented. It enables users to realize diverse functions with limited hardware. CLB-based basic logic gates (OR and AND) are first constructed and demonstrated their erasability and field programmability. Furthermore, by adding the appropriate operation-controlling strands, multiple rounds of programming are achieved among five different logic operations on a two-layer circuit. Subsequently, a circuit is successfully built to implement two fundamental binary calculators: half-adder and half-subtractor, proving that the design can imitate silicon-based binary circuits. Finally, a comprehensive CLB-based circuit is built that enables multiple rounds of switch among seven different logic operations including half-adding and half-subtracting. Overall, the CLB-based erasable field-programmable circuit immensely enhances their practicability. It is believed that design can be widely used in DNA logic networks due to its efficiency and convenience.

摘要

DNA 由于其出色的生物相容性和可编程性,通常被用作构建人工逻辑网络的底物。到目前为止,DNA 逻辑电路正在迅速发展,以实现更高级的操作。然而,目前大多数 DNA 电路仍然是一次性的,缺乏现场可编程性,从而限制了它们的实用性。在此,受可配置逻辑块(CLB)的启发,提出了一种基于 CLB 的可擦除现场可编程 DNA 电路,该电路使用剪辑链作为其操作控制信号。它使用有限的硬件就能实现各种功能。首先构建了基于 CLB 的基本逻辑门(或门和与门),并证明了它们的可擦除性和现场可编程性。此外,通过添加适当的操作控制链,在两层电路上实现了五种不同逻辑操作之间的多轮编程。随后,成功构建了一个电路来实现两个基本的二进制计算器:半加器和半减器,证明了该设计可以模拟基于硅的二进制电路。最后,构建了一个全面的基于 CLB 的电路,能够在包括半加和半减在内的七种不同逻辑操作之间进行多轮开关。总的来说,基于 CLB 的可擦除现场可编程电路极大地提高了它们的实用性。由于其高效和方便,相信该设计可以广泛应用于 DNA 逻辑网络。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b1b/11234411/558b5516967e/ADVS-11-2400011-g001.jpg

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