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采用重组酶聚合酶扩增法快速特异性检测。

Rapid and specific detection of by recombinase polymerase amplification assay.

机构信息

Institute of Sugar Beet Research, Holtenser Landstraße 77, 37079 Göttingen, Germany.

Agricultural Entomology, Department of Crop Sciences, Faculty of Agricultural Sciences, University of Göttingen, Grisebachstrasse 6, 37077 Göttingen, Germany.

出版信息

Bull Entomol Res. 2024 Jun;114(3):309-316. doi: 10.1017/S0007485324000099. Epub 2024 May 6.

DOI:10.1017/S0007485324000099
PMID:38708571
Abstract

(Hemiptera: Cixiidae) is the main vector of an emerging and fast spreading sugar beet disease, the syndrome 'basses richesses' (SBR), in different European countries. The disease is caused by the γ-3-proteobacterium ' Arsenophonus phytopathogenicus' and the phytoplasma ' Phytoplasma solani' which are exclusively transmitted by planthoppers and can lead to a significant loss of sugar content and yield. Monitoring of this insect vector is important for disease management. However, the morphological identification is time consuming and challenging as two additional cixiid species and with a very close morphology have been reported in sugar beet fields. Further, identification of females and nymphs of at species level based on taxonomic key is not possible. In this study, an isothermal nucleic acid amplification based on recombinase polymerase amplification (RPA) was developed to specifically detect In addition, real-time RPA was developed to detect both adults (male and female) and nymph stages using pure or crude nucleic acid extracts. The sensitivity of the real-time RPA for detection of was comparable to real-time PCR, but a shorter time (< 7 min) was required. This is a first report for real-time RPA application for detection using crude nucleic acid templates which can be applied for fast and specific detection of this vector in the field.

摘要

(半翅目:沫蝉科)是一种新兴且传播迅速的甜菜单种病毒性疾病“basseres richesses”(SBR)在不同欧洲国家的主要媒介。这种疾病是由γ-3 保护细菌“植原体致病性阿氏菌”和植原体“茄螺原体”引起的,它们只能通过叶蝉传播,会导致糖含量和产量的显著损失。监测这种昆虫媒介对于疾病管理非常重要。然而,形态鉴定既耗时又具有挑战性,因为在甜菜地已经报告了两种形态非常接近的额外沫蝉物种 和 。此外,根据分类学关键特征,无法对 和 的雌性和若虫进行物种水平的鉴定。在这项研究中,开发了一种基于重组酶聚合酶扩增(RPA)的等温核酸扩增技术,专门用于检测 。此外,还开发了实时 RPA,可使用纯或粗核酸提取物检测成虫(雄性和雌性)和若虫阶段。实时 RPA 检测 的灵敏度与实时 PCR 相当,但所需时间更短(<7 分钟)。这是首次报道使用粗核酸模板进行实时 RPA 应用,可用于现场快速、特异性检测该媒介。

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