Centre de Biologie Structurale, Univ Montpellier, CNRS UMR 5048, INSERM U 1054, Montpellier, France.
PHIM Plant Health Institute, Univ Montpellier, INRAE, CIRAD, Institut Agro, IRD, Montpellier, France.
PLoS Pathog. 2024 May 6;20(5):e1012176. doi: 10.1371/journal.ppat.1012176. eCollection 2024 May.
Magnaporthe AVRs and ToxB-like (MAX) effectors constitute a family of secreted virulence proteins in the fungus Pyricularia oryzae (syn. Magnaporthe oryzae), which causes blast disease on numerous cereals and grasses. In spite of high sequence divergence, MAX effectors share a common fold characterized by a ß-sandwich core stabilized by a conserved disulfide bond. In this study, we investigated the structural landscape and diversity within the MAX effector repertoire of P. oryzae. Combining experimental protein structure determination and in silico structure modeling we validated the presence of the conserved MAX effector core domain in 77 out of 94 groups of orthologs (OG) identified in a previous population genomic study. Four novel MAX effector structures determined by NMR were in remarkably good agreement with AlphaFold2 (AF2) predictions. Based on the comparison of the AF2-generated 3D models we propose a classification of the MAX effectors superfamily in 20 structural groups that vary in the canonical MAX fold, disulfide bond patterns, and additional secondary structures in N- and C-terminal extensions. About one-third of the MAX family members remain singletons, without strong structural relationship to other MAX effectors. Analysis of the surface properties of the AF2 MAX models also highlights the high variability within the MAX family at the structural level, potentially reflecting the wide diversity of their virulence functions and host targets.
稻瘟病菌(Pyricularia oryzae)(也称稻梨孢菌 Magnaporthe oryzae)中的 AVRs 和 ToxB 样(MAX)效应子是一类分泌的毒力蛋白,会导致许多谷物和草类的稻瘟病。尽管序列高度分化,但 MAX 效应子具有共同的折叠结构,其特征是由保守的二硫键稳定的β-三明治核心。在这项研究中,我们研究了稻瘟病菌 MAX 效应子库的结构景观和多样性。通过实验蛋白结构测定和计算结构建模,我们验证了在先前的群体基因组研究中鉴定的 94 个同源物(OG)组中的 77 个组中存在保守的 MAX 效应子核心结构域。通过 NMR 确定的四个新的 MAX 效应子结构与 AlphaFold2(AF2)预测结果非常吻合。基于对 AF2 生成的 3D 模型的比较,我们提出了 20 个结构群的 MAX 效应子超家族分类,这些结构群在典型的 MAX 折叠、二硫键模式以及 N 和 C 末端延伸中的附加二级结构方面存在差异。约三分之一的 MAX 家族成员仍然是单倍体,与其他 MAX 效应子没有强烈的结构关系。对 AF2 MAX 模型表面特性的分析也突出了 MAX 家族在结构水平上的高度可变性,这可能反映了它们毒力功能和宿主靶标的广泛多样性。