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在龟纹瓢虫中 P450 基因家族的全基因组鉴定、分子进化和基因表达。

Genome-wide identification, molecular evolution and gene expression of P450 gene family in Cyrtotrachelus buqueti.

机构信息

Key Laboratory of Sichuan Province for Bamboo Pests Control and Resource Development, Leshan Normal University, No. 778 Binhe Road, Shizhong District, Leshan, 614000, Sichuan, China.

College of Life Science, Leshan Normal University, No. 778 Binhe Road, Shizhong District, Leshan, 614000, Sichuan, China.

出版信息

BMC Genomics. 2024 May 8;25(1):453. doi: 10.1186/s12864-024-10372-5.

Abstract

BACKGROUND

Insect Cytochrome P450 monooxygenase (CYPs or P450s) plays an important role in detoxifying insecticides, causing insect populations to develop resistance. However, the molecular functions of P450 gene family in Cyrtotrachelus buqueti genome are still lacking.

RESULTS

In this study, 71 CbuP450 genes have been identified. The amino acids length of CbuP450 proteins was between 183 aa ~ 1041 aa. They are proteins with transmembrane domains. The main component of their secondary structure is α-helix and random coils. Phylogenetic analysis showed that C. buqueti and Rhynchophorus ferrugineus were the most closely related. This gene family has 29 high-frequency codons, which tend to use A/T bases and A/T ending codons. Gene expression analysis showed that CbuP450_23 in the female adult may play an important role on high temperature resistance, and CbuP450_17 in the larval may play an important role on low temperature tolerance. CbuP450_10, CbuP450_17, CbuP450_23, CbuP450_10, CbuP450_16, CbuP450_20, CbuP450_23 and CbuP450_ 29 may be related to the regulation of bamboo fiber degradation genes in C. buqueti. Protein interaction analysis indicates that most CbuP450 proteins are mainly divided into three aspects: encoding the biosynthesis of ecdysteroids, participating in the decomposition of synthetic insecticides, metabolizing insect hormones, and participating in the detoxification of compounds.

CONCLUSIONS

We systematically analyzed the gene and protein characteristics, gene expression, and protein interactions of CbuP450 gene family, revealing the key genes involved in the stress response of CbuP450 gene family in the resistance of C. buqueti to high or low temperature stress, and identified the key CbuP450 proteins involved in important life activity metabolism. These results provided a reference for further research on the function of P450 gene family in C. buqueti.

摘要

背景

昆虫细胞色素 P450 单加氧酶(CYPs 或 P450s)在解毒杀虫剂方面发挥着重要作用,导致昆虫种群产生抗药性。然而,Cyrtotrachelus buqueti 基因组中 P450 基因家族的分子功能仍不清楚。

结果

本研究鉴定了 71 个 CbuP450 基因。CbuP450 蛋白的氨基酸长度在 183 aa~1041 aa 之间。它们是具有跨膜结构域的蛋白质。其二级结构的主要成分是α-螺旋和无规卷曲。系统发育分析表明,C. buqueti 和 Rhynchophorus ferrugineus 最为密切相关。该基因家族有 29 个高频密码子,倾向于使用 A/T 碱基和 A/T 结尾密码子。基因表达分析表明,雌性成虫中的 CbuP450_23 可能在高温抗性中发挥重要作用,而幼虫中的 CbuP450_17 可能在低温耐受性中发挥重要作用。CbuP450_10、CbuP450_17、CbuP450_23、CbuP450_10、CbuP450_16、CbuP450_20、CbuP450_23 和 CbuP450_29 可能与 C. buqueti 中竹纤维降解基因的调控有关。蛋白相互作用分析表明,大多数 CbuP450 蛋白主要分为三个方面:编码蜕皮甾类的生物合成、参与合成杀虫剂的分解、代谢昆虫激素和参与化合物的解毒。

结论

本研究系统分析了 CbuP450 基因家族的基因和蛋白特征、基因表达和蛋白相互作用,揭示了 CbuP450 基因家族在 C. buqueti 对高温或低温胁迫的抗性中应激响应的关键基因,并鉴定了参与重要生命活动代谢的关键 CbuP450 蛋白。这些结果为进一步研究 P450 基因家族在 C. buqueti 中的功能提供了参考。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50cb/11080265/ca9bcea6a645/12864_2024_10372_Fig1_HTML.jpg

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