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转移 RNA 衍生片段 tRF-23-Q99P9P9NDD 通过靶向. 促进胃癌的进展。

Transfer RNA-derived fragment tRF-23-Q99P9P9NDD promotes progression of gastric cancer by targeting .

机构信息

Medical School of Nantong University, Nantong University, Nantong 226001, China.

Department of Laboratory Medicine, Affiliated Hospital of Nantong University, Nantong 226001, China.

出版信息

J Zhejiang Univ Sci B. 2024 May 15;25(5):438-450. doi: 10.1631/jzus.B2300215.

Abstract

Gastric cancer (GC) is one of the most common gastrointestinal tumors. As a newly discovered type of non-coding RNAs, transfer RNA (tRNA)‍-derived small RNAs (tsRNAs) play a dual biological role in cancer. Our previous studies have demonstrated the potential of tRF-23-Q99P9P9NDD as a diagnostic and prognostic biomarker for GC. In this work, we confirmed for the first time that tRF-23-Q99P9P9NDD can promote the proliferation, migration, and invasion of GC cells in vitro. The dual luciferase reporter gene assay confirmed that tRF-23-Q99P9P9NDD could bind to the 3' untranslated region (UTR) site of acyl-coenzyme A dehydrogenase short/branched chain (). In addition, could rescue the effect of tRF-23-Q99P9P9NDD on GC cells. Next, we used Gene Ontology (GO), the Kyoto Encyclopedia of Genes and Genomes (KEGG), and Gene Set Enrichment Analysis (GSEA) to find that downregulated in GC may promote lipid accumulation by inhibiting fatty acid catabolism and ferroptosis. Finally, we verified the correlation between and 12 ferroptosis genes at the transcriptional level, as well as the changes in reactive oxygen species (ROS) levels by flow cytometry. In summary, this study proposes that tRF-23-Q99P9P9NDD may affect GC lipid metabolism and ferroptosis by targeting , thereby promoting GC progression. It provides a theoretical basis for the diagnostic and prognostic monitoring value of GC and opens up new possibilities for treatment.

摘要

胃癌(GC)是最常见的胃肠道肿瘤之一。转移 RNA(tRNA)衍生的小 RNA(tsRNAs)作为一种新发现的非编码 RNA 类型,在癌症中具有双重生物学作用。我们之前的研究表明,tRF-23-Q99P9P9NDD 作为 GC 的诊断和预后生物标志物具有潜力。在这项工作中,我们首次证实 tRF-23-Q99P9P9NDD 可以在体外促进 GC 细胞的增殖、迁移和侵袭。双荧光素酶报告基因检测证实,tRF-23-Q99P9P9NDD 可以与酰基辅酶 A 脱氢酶短/支链()的 3'非翻译区(UTR)位点结合。此外, 可以挽救 tRF-23-Q99P9P9NDD 对 GC 细胞的作用。接下来,我们使用基因本体论(GO)、京都基因与基因组百科全书(KEGG)和基因集富集分析(GSEA)发现,GC 中下调的 可能通过抑制脂肪酸代谢和铁死亡来促进脂质积累。最后,我们在转录水平上验证了 与 12 个铁死亡基因之间的相关性,以及通过流式细胞术检测活性氧(ROS)水平的变化。总之,本研究提出 tRF-23-Q99P9P9NDD 可能通过靶向 影响 GC 脂质代谢和铁死亡,从而促进 GC 进展。它为 GC 的诊断和预后监测价值提供了理论依据,并为治疗开辟了新的可能性。

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