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采用机器学习和卷积神经网络的血浆蛋白质组学阿尔茨海默病早期筛查和分期检测。

Alzheimer's disease early screening and staged detection with plasma proteome using machine learning and convolutional neural network.

机构信息

School of Information and Electronics, Beijing Institute of Technology, Beijing, China.

The Department of Information Engineering, The Chinese University of Hong Kong, Hong Kong, China.

出版信息

Eur J Neurosci. 2024 Jul;60(2):4034-4048. doi: 10.1111/ejn.16392. Epub 2024 May 19.

DOI:10.1111/ejn.16392
PMID:38764192
Abstract

Alzheimer's disease (AD) stands as the prevalent progressive neurodegenerative disease, precipitating cognitive impairment and even memory loss. Amyloid biomarkers have been extensively used in the diagnosis of AD. However, amyloid proteins offer limited information about the disease process and accurate diagnosis depends on the presence of a substantial accumulation of amyloid deposition which significantly impedes the early screening of AD. In this study, we have combined plasma proteomics with an ensemble learning model (CatBoost) to develop a cost-effective and non-invasive diagnostic method for AD. A longitudinal panel has been identified that can serve as reliable biomarkers across the entire progression of AD. Simultaneously, we have developed a neural network algorithm that utilizes plasma proteins to detect stages of Alzheimer's disease. Based on the developed longitudinal panel, the CatBoost model achieved an area under the operating curve of at least 0.90 in distinguishing mild cognitive impairment from cognitively normal. The neural network model was utilized for the detection of three stages of AD, and the results demonstrated that the neural network model exhibited an accuracy as high as 0.83, surpassing that of the traditional machine learning model.

摘要

阿尔茨海默病(AD)是一种常见的进行性神经退行性疾病,可导致认知障碍甚至记忆丧失。淀粉样蛋白生物标志物已被广泛用于 AD 的诊断。然而,淀粉样蛋白提供的关于疾病过程的信息有限,并且准确的诊断取决于淀粉样蛋白沉积的大量积累,这大大阻碍了 AD 的早期筛查。在这项研究中,我们将血浆蛋白质组学与集成学习模型(CatBoost)相结合,开发了一种经济有效的、非侵入性的 AD 诊断方法。已经确定了一个纵向面板,它可以作为 AD 整个进展过程中的可靠生物标志物。同时,我们开发了一种利用血浆蛋白检测阿尔茨海默病阶段的神经网络算法。基于开发的纵向面板,CatBoost 模型在区分轻度认知障碍和认知正常方面的曲线下面积至少达到 0.90。神经网络模型用于检测 AD 的三个阶段,结果表明神经网络模型的准确性高达 0.83,超过了传统机器学习模型。

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