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基于 CRISPR/Cas13a 辅助化学发光共振能量转移的灵敏现场检测

Sensitive and on-Site Detection of Based on CRISPR/Cas 13a-Assisted Chemiluminescence Resonance Energy Transfer.

机构信息

College of Food Science, Southwest University, Chongqing 400715, People's Republic of China.

Joint International Research Laboratory of Animal Health and Animal Food Safety, College of Veterinary Medicine, Southwest University, Chongqing 400715, People's Republic of China.

出版信息

Anal Chem. 2024 Jun 4;96(22):9270-9277. doi: 10.1021/acs.analchem.4c01782. Epub 2024 May 21.

Abstract

Developing a specific, sensitive, rapid, and on-site method for detecting pathogenic bacteria in food samples is critical to ensuring public safety. This article demonstrates a CRISPR/Cas13a system and a chemiluminescence resonance energy transfer (CRET) (CRISPR/Cas 13a-assisted CRET)-based strategy for sensitive and on-site detection of pathogenic bacteria in real samples. Once the hybrid double strand of aptamer-cRNA recognizes the target model bacteria of (), the released cRNA would bind with CRISPR/Cas 13a to form a complex of cRNA-CRISPR/Cas 13a, which could cleave the RNA molecule in the detecting probe of horseradish peroxidase (HRP) modified-gold nanoparticles (AuNPs) linked by RNA (AuNPs-RNA-HRP), resulting in an enhanced chemiluminescence signal due to the CRET "OFF" phenomenon after introducing the chemiluminescence substrate of luminol. The CRISPR/Cas 13a-assisted CRET strategy successfully detected in drinking water and milk with detection limits of 20 and 30 cfu/mL, respectively, within the recovery of 90.07-105.50%. Furthermore, after integrating with an immunochromatographic test strip (ICTS), the CRISPR/Cas 13a-assisted CRET strategy achieved the on-site detection of as low as 10 cfu/mL of in drinking water and milk via a smartphone, which is about 10 times lower than that in the previously reported AuNPs-based colorimetric ICTS, demonstrating a convenient and sensitive detection method for in real samples.

摘要

开发一种用于检测食品样本中致病菌的特异性、灵敏性、快速性和现场方法对于确保公共安全至关重要。本文展示了一种基于 CRISPR/Cas13a 系统和化学发光共振能量转移(CRET)(CRISPR/Cas13a 辅助 CRET)的策略,用于灵敏和现场检测实际样本中的致病菌。一旦适配体-cRNA 的杂交双链识别出目标模式细菌(),释放的 cRNA 将与 CRISPR/Cas13a 结合形成 cRNA-CRISPR/Cas13a 复合物,该复合物可以切割与 RNA 连接的辣根过氧化物酶(HRP)修饰金纳米粒子(AuNPs)的检测探针中的 RNA 分子(AuNPs-RNA-HRP),由于引入化学发光底物鲁米诺后发生 CRET“OFF”现象,导致化学发光信号增强。CRISPR/Cas13a 辅助 CRET 策略成功地检测了饮用水和牛奶中的,检测限分别为 20 和 30 cfu/mL,回收率为 90.07-105.50%。此外,通过与免疫层析测试条(ICTS)集成,CRISPR/Cas13a 辅助 CRET 策略通过智能手机实现了低至 10 cfu/mL 的饮用水和牛奶中致病菌的现场检测,比以前报道的基于 AuNPs 的比色 ICTS 低约 10 倍,证明了一种用于实际样品中致病菌的便捷和灵敏检测方法。

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